Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brf1Q8CFK2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Brf1Q8CFK2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Brf1Q8CFK2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Brf1Q8CFK2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Brf1Q8CFK2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Brf1Q8CFK2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Brf1Q8CFK2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Brf1Q8CFK2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
Brf1Q8CFK2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Brf1Q8CFK2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Brf1Q8CFK2 Gm6550-201ENSMUST00000187574 993 ntBASIC18.64■□□□□ 0.57
Brf1Q8CFK2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Brf1Q8CFK2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.64■□□□□ 0.57
Brf1Q8CFK2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Brf1Q8CFK2 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Brf1Q8CFK2 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Brf1Q8CFK2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Brf1Q8CFK2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Brf1Q8CFK2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Brf1Q8CFK2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Brf1Q8CFK2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Brf1Q8CFK2 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Brf1Q8CFK2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Brf1Q8CFK2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Brf1Q8CFK2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Brf1Q8CFK2 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.63■□□□□ 0.57
Brf1Q8CFK2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Brf1Q8CFK2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Brf1Q8CFK2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Brf1Q8CFK2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Brf1Q8CFK2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.63■□□□□ 0.57
Brf1Q8CFK2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Brf1Q8CFK2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Brf1Q8CFK2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Brf1Q8CFK2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Brf1Q8CFK2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Brf1Q8CFK2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Brf1Q8CFK2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Brf1Q8CFK2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Brf1Q8CFK2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Brf1Q8CFK2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Brf1Q8CFK2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Brf1Q8CFK2 Gm7222-201ENSMUST00000117512 906 ntBASIC18.62■□□□□ 0.57
Brf1Q8CFK2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.62■□□□□ 0.57
Brf1Q8CFK2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Brf1Q8CFK2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Brf1Q8CFK2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Brf1Q8CFK2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Brf1Q8CFK2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Brf1Q8CFK2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Brf1Q8CFK2 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Brf1Q8CFK2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Brf1Q8CFK2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Brf1Q8CFK2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Brf1Q8CFK2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Brf1Q8CFK2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms