Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.2■□□□□ 0.34
Ccdc38Q8CDN8 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc38Q8CDN8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc38Q8CDN8 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.19■□□□□ 0.34
Ccdc38Q8CDN8 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ccdc38Q8CDN8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ccdc38Q8CDN8 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc38Q8CDN8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc38Q8CDN8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc38Q8CDN8 Gm12497-201ENSMUST00000138778 237 ntBASIC17.19■□□□□ 0.34
Ccdc38Q8CDN8 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc38Q8CDN8 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc38Q8CDN8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.19■□□□□ 0.34
Ccdc38Q8CDN8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.19■□□□□ 0.34
Ccdc38Q8CDN8 Gm18622-201ENSMUST00000219361 595 ntBASIC17.19■□□□□ 0.34
Ccdc38Q8CDN8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc38Q8CDN8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc38Q8CDN8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc38Q8CDN8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc38Q8CDN8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc38Q8CDN8 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc38Q8CDN8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc38Q8CDN8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc38Q8CDN8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc38Q8CDN8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc38Q8CDN8 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc38Q8CDN8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc38Q8CDN8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.18■□□□□ 0.34
Ccdc38Q8CDN8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc38Q8CDN8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.18■□□□□ 0.34
Ccdc38Q8CDN8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Ccdc38Q8CDN8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.18■□□□□ 0.34
Ccdc38Q8CDN8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ccdc38Q8CDN8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc38Q8CDN8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc38Q8CDN8 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc38Q8CDN8 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.18■□□□□ 0.34
Ccdc38Q8CDN8 Gm14722-201ENSMUST00000118943 689 ntBASIC17.18■□□□□ 0.34
Ccdc38Q8CDN8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.18■□□□□ 0.34
Ccdc38Q8CDN8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Ccdc38Q8CDN8 Gm19164-201ENSMUST00000210667 640 ntBASIC17.18■□□□□ 0.34
Ccdc38Q8CDN8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Ccdc38Q8CDN8 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc38Q8CDN8 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc38Q8CDN8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc38Q8CDN8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.18■□□□□ 0.34
Ccdc38Q8CDN8 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc38Q8CDN8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ccdc38Q8CDN8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc38Q8CDN8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc38Q8CDN8 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.17■□□□□ 0.34
Ccdc38Q8CDN8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.17■□□□□ 0.34
Ccdc38Q8CDN8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc38Q8CDN8 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc38Q8CDN8 Gm4459-201ENSMUST00000118750 468 ntBASIC17.17■□□□□ 0.34
Ccdc38Q8CDN8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ccdc38Q8CDN8 Gm7506-201ENSMUST00000207758 815 ntBASIC17.17■□□□□ 0.34
Ccdc38Q8CDN8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc38Q8CDN8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc38Q8CDN8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ccdc38Q8CDN8 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.17■□□□□ 0.34
Ccdc38Q8CDN8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc38Q8CDN8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc38Q8CDN8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc38Q8CDN8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc38Q8CDN8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.16■□□□□ 0.34
Ccdc38Q8CDN8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc38Q8CDN8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.16■□□□□ 0.34
Ccdc38Q8CDN8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc38Q8CDN8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc38Q8CDN8 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc38Q8CDN8 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc38Q8CDN8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc38Q8CDN8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Ccdc38Q8CDN8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc38Q8CDN8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc38Q8CDN8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc38Q8CDN8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Ccdc38Q8CDN8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc38Q8CDN8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.16■□□□□ 0.34
Ccdc38Q8CDN8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.16■□□□□ 0.34
Ccdc38Q8CDN8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Ccdc38Q8CDN8 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.16■□□□□ 0.34
Ccdc38Q8CDN8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ccdc38Q8CDN8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc38Q8CDN8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Ccdc38Q8CDN8 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.16■□□□□ 0.34
Ccdc38Q8CDN8 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc38Q8CDN8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Ccdc38Q8CDN8 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc38Q8CDN8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ccdc38Q8CDN8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc38Q8CDN8 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc38Q8CDN8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc38Q8CDN8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc38Q8CDN8 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ccdc38Q8CDN8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc38Q8CDN8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms