Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vcpip1Q8CDG3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vcpip1Q8CDG3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vcpip1Q8CDG3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vcpip1Q8CDG3 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.61■□□□□ 0.25
Vcpip1Q8CDG3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vcpip1Q8CDG3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vcpip1Q8CDG3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vcpip1Q8CDG3 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Gm24589-201ENSMUST00000116692 94 ntBASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcpip1Q8CDG3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Gm27357-201ENSMUST00000183754 135 ntBASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Gm43514-201ENSMUST00000198852 424 ntBASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Gm9172-201ENSMUST00000212092 954 ntBASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Gm5867-201ENSMUST00000063197 592 ntBASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
Vcpip1Q8CDG3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vcpip1Q8CDG3 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Vcpip1Q8CDG3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vcpip1Q8CDG3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vcpip1Q8CDG3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Vcpip1Q8CDG3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vcpip1Q8CDG3 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Vcpip1Q8CDG3 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Vcpip1Q8CDG3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Vcpip1Q8CDG3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.58■□□□□ 0.24
Vcpip1Q8CDG3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.58■□□□□ 0.24
Vcpip1Q8CDG3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.58■□□□□ 0.24
Vcpip1Q8CDG3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.58■□□□□ 0.24
Vcpip1Q8CDG3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vcpip1Q8CDG3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.58■□□□□ 0.24
Vcpip1Q8CDG3 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Vcpip1Q8CDG3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.58■□□□□ 0.24
Vcpip1Q8CDG3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vcpip1Q8CDG3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vcpip1Q8CDG3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms