Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 BC037039-201ENSMUST00000192003 2205 ntBASIC17.99■□□□□ 0.47
Alx1Q8C8B0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.99■□□□□ 0.47
Alx1Q8C8B0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Alx1Q8C8B0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Alx1Q8C8B0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Alx1Q8C8B0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Alx1Q8C8B0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Alx1Q8C8B0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Alx1Q8C8B0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Alx1Q8C8B0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Alx1Q8C8B0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Alx1Q8C8B0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Alx1Q8C8B0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Alx1Q8C8B0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Alx1Q8C8B0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Alx1Q8C8B0 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Alx1Q8C8B0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Alx1Q8C8B0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Alx1Q8C8B0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Alx1Q8C8B0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Alx1Q8C8B0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Alx1Q8C8B0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Alx1Q8C8B0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Alx1Q8C8B0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.98■□□□□ 0.47
Alx1Q8C8B0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.98■□□□□ 0.47
Alx1Q8C8B0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.98■□□□□ 0.47
Alx1Q8C8B0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.98■□□□□ 0.47
Alx1Q8C8B0 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Alx1Q8C8B0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Alx1Q8C8B0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Alx1Q8C8B0 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Alx1Q8C8B0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Alx1Q8C8B0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Alx1Q8C8B0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Alx1Q8C8B0 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Alx1Q8C8B0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Alx1Q8C8B0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Alx1Q8C8B0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Alx1Q8C8B0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.96■□□□□ 0.47
Alx1Q8C8B0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Alx1Q8C8B0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Alx1Q8C8B0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Alx1Q8C8B0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Alx1Q8C8B0 Gm15467-201ENSMUST00000120582 445 ntBASIC17.96■□□□□ 0.47
Alx1Q8C8B0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.96■□□□□ 0.47
Alx1Q8C8B0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.96■□□□□ 0.47
Alx1Q8C8B0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.96■□□□□ 0.47
Alx1Q8C8B0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Alx1Q8C8B0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Alx1Q8C8B0 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Alx1Q8C8B0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Alx1Q8C8B0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Alx1Q8C8B0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Alx1Q8C8B0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Alx1Q8C8B0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Alx1Q8C8B0 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Alx1Q8C8B0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.96■□□□□ 0.47
Alx1Q8C8B0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Alx1Q8C8B0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Alx1Q8C8B0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Alx1Q8C8B0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.95■□□□□ 0.46
Alx1Q8C8B0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Alx1Q8C8B0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Alx1Q8C8B0 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.95■□□□□ 0.46
Alx1Q8C8B0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.95■□□□□ 0.46
Alx1Q8C8B0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Alx1Q8C8B0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Alx1Q8C8B0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Alx1Q8C8B0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Alx1Q8C8B0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Alx1Q8C8B0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Alx1Q8C8B0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Alx1Q8C8B0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms