Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf2Q8BZT2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf2Q8BZT2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.63■□□□□ 0.09
Sh3rf2Q8BZT2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf2Q8BZT2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Sh3rf2Q8BZT2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf2Q8BZT2 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.63■□□□□ 0.09
Sh3rf2Q8BZT2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf2Q8BZT2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf2Q8BZT2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf2Q8BZT2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf2Q8BZT2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Sh3rf2Q8BZT2 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf2Q8BZT2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Sh3rf2Q8BZT2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf2Q8BZT2 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf2Q8BZT2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Sh3rf2Q8BZT2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf2Q8BZT2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Sh3rf2Q8BZT2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf2Q8BZT2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf2Q8BZT2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Sh3rf2Q8BZT2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Sh3rf2Q8BZT2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Sh3rf2Q8BZT2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf2Q8BZT2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf2Q8BZT2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 Gm10499-201ENSMUST00000174094 934 ntBASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 Gm27301-201ENSMUST00000184012 127 ntBASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf2Q8BZT2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf2Q8BZT2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf2Q8BZT2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf2Q8BZT2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.61■□□□□ 0.09
Sh3rf2Q8BZT2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf2Q8BZT2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf2Q8BZT2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Sh3rf2Q8BZT2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf2Q8BZT2 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.61■□□□□ 0.09
Sh3rf2Q8BZT2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf2Q8BZT2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.61■□□□□ 0.09
Sh3rf2Q8BZT2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Sh3rf2Q8BZT2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf2Q8BZT2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf2Q8BZT2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.61■□□□□ 0.09
Sh3rf2Q8BZT2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf2Q8BZT2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Sh3rf2Q8BZT2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf2Q8BZT2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3rf2Q8BZT2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms