Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4Q8BQZ5 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4Q8BQZ5 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Cpsf4Q8BQZ5 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Cpsf4Q8BQZ5 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.03■□□□□ -0
Cpsf4Q8BQZ5 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4Q8BQZ5 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4Q8BQZ5 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf4Q8BQZ5 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Cpsf4Q8BQZ5 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Cpsf4Q8BQZ5 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cpsf4Q8BQZ5 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Cpsf4Q8BQZ5 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cpsf4Q8BQZ5 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cpsf4Q8BQZ5 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Cpsf4Q8BQZ5 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.02■□□□□ -0
Cpsf4Q8BQZ5 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.02■□□□□ -0
Cpsf4Q8BQZ5 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cpsf4Q8BQZ5 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.02■□□□□ -0
Cpsf4Q8BQZ5 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.02■□□□□ -0
Cpsf4Q8BQZ5 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Cpsf4Q8BQZ5 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cpsf4Q8BQZ5 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cpsf4Q8BQZ5 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Cpsf4Q8BQZ5 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpsf4Q8BQZ5 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpsf4Q8BQZ5 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpsf4Q8BQZ5 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Cpsf4Q8BQZ5 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Cpsf4Q8BQZ5 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpsf4Q8BQZ5 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpsf4Q8BQZ5 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Cpsf4Q8BQZ5 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf4Q8BQZ5 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf4Q8BQZ5 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf4Q8BQZ5 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf4Q8BQZ5 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf4Q8BQZ5 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf4Q8BQZ5 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf4Q8BQZ5 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf4Q8BQZ5 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf4Q8BQZ5 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Cpsf4Q8BQZ5 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf4Q8BQZ5 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf4Q8BQZ5 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.01□□□□□ -0.01
Cpsf4Q8BQZ5 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf4Q8BQZ5 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.01□□□□□ -0.01
Cpsf4Q8BQZ5 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
Cpsf4Q8BQZ5 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.01□□□□□ -0.01
Cpsf4Q8BQZ5 Asic1-205ENSMUST00000228185 1818 ntBASIC15.01□□□□□ -0.01
Cpsf4Q8BQZ5 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf4Q8BQZ5 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cpsf4Q8BQZ5 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cpsf4Q8BQZ5 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf4Q8BQZ5 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cpsf4Q8BQZ5 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf4Q8BQZ5 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf4Q8BQZ5 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf4Q8BQZ5 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf4Q8BQZ5 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cpsf4Q8BQZ5 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf4Q8BQZ5 Gm1818-201ENSMUST00000169406 1184 ntBASIC15□□□□□ -0.01
Cpsf4Q8BQZ5 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf4Q8BQZ5 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf4Q8BQZ5 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf4Q8BQZ5 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf4Q8BQZ5 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Cpsf4Q8BQZ5 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Cpsf4Q8BQZ5 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15□□□□□ -0.01
Cpsf4Q8BQZ5 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf4Q8BQZ5 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf4Q8BQZ5 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpsf4Q8BQZ5 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 Gm25745-201ENSMUST00000174945 133 ntBASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 Gm5864-201ENSMUST00000202263 970 ntBASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpsf4Q8BQZ5 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms