Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col16a1Q8BLX7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col16a1Q8BLX7 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC20.07■□□□□ 0.8
Col16a1Q8BLX7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
Col16a1Q8BLX7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Col16a1Q8BLX7 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col16a1Q8BLX7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Col16a1Q8BLX7 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC20.06■□□□□ 0.8
Col16a1Q8BLX7 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC20.06■□□□□ 0.8
Col16a1Q8BLX7 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col16a1Q8BLX7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Col16a1Q8BLX7 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col16a1Q8BLX7 Gm19430-201ENSMUST00000193847 2137 ntBASIC20.06■□□□□ 0.8
Col16a1Q8BLX7 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Col16a1Q8BLX7 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col16a1Q8BLX7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col16a1Q8BLX7 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col16a1Q8BLX7 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Col16a1Q8BLX7 Gm6912-201ENSMUST00000117218 544 ntBASIC20.05■□□□□ 0.8
Col16a1Q8BLX7 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col16a1Q8BLX7 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col16a1Q8BLX7 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC20.05■□□□□ 0.8
Col16a1Q8BLX7 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC20.05■□□□□ 0.8
Col16a1Q8BLX7 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC20.05■□□□□ 0.8
Col16a1Q8BLX7 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col16a1Q8BLX7 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col16a1Q8BLX7 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col16a1Q8BLX7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col16a1Q8BLX7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col16a1Q8BLX7 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col16a1Q8BLX7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Col16a1Q8BLX7 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Col16a1Q8BLX7 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col16a1Q8BLX7 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col16a1Q8BLX7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col16a1Q8BLX7 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col16a1Q8BLX7 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col16a1Q8BLX7 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Col16a1Q8BLX7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Col16a1Q8BLX7 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Col16a1Q8BLX7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col16a1Q8BLX7 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC20.04■□□□□ 0.8
Col16a1Q8BLX7 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col16a1Q8BLX7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col16a1Q8BLX7 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col16a1Q8BLX7 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Col16a1Q8BLX7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col16a1Q8BLX7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col16a1Q8BLX7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col16a1Q8BLX7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.03■□□□□ 0.8
Col16a1Q8BLX7 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col16a1Q8BLX7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col16a1Q8BLX7 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Col16a1Q8BLX7 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC20.03■□□□□ 0.8
Col16a1Q8BLX7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col16a1Q8BLX7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.03■□□□□ 0.8
Col16a1Q8BLX7 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Col16a1Q8BLX7 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col16a1Q8BLX7 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col16a1Q8BLX7 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC20.03■□□□□ 0.8
Col16a1Q8BLX7 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col16a1Q8BLX7 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC20.03■□□□□ 0.8
Col16a1Q8BLX7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col16a1Q8BLX7 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col16a1Q8BLX7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col16a1Q8BLX7 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col16a1Q8BLX7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col16a1Q8BLX7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col16a1Q8BLX7 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col16a1Q8BLX7 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC20.02■□□□□ 0.8
Col16a1Q8BLX7 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC20.02■□□□□ 0.8
Col16a1Q8BLX7 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Col16a1Q8BLX7 AC132467.2-202ENSMUST00000227726 559 ntBASIC20.02■□□□□ 0.8
Col16a1Q8BLX7 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col16a1Q8BLX7 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col16a1Q8BLX7 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC20.02■□□□□ 0.8
Col16a1Q8BLX7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Col16a1Q8BLX7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col16a1Q8BLX7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col16a1Q8BLX7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col16a1Q8BLX7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col16a1Q8BLX7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Col16a1Q8BLX7 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col16a1Q8BLX7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col16a1Q8BLX7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col16a1Q8BLX7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col16a1Q8BLX7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC20.01■□□□□ 0.79
Col16a1Q8BLX7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Col16a1Q8BLX7 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col16a1Q8BLX7 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col16a1Q8BLX7 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col16a1Q8BLX7 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Col16a1Q8BLX7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col16a1Q8BLX7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col16a1Q8BLX7 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Col16a1Q8BLX7 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Col16a1Q8BLX7 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC20.01■□□□□ 0.79
Col16a1Q8BLX7 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col16a1Q8BLX7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col16a1Q8BLX7 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms