Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Gm14767-201ENSMUST00000121559 586 ntBASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Gm9824-201ENSMUST00000178707 561 ntBASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Gm19164-201ENSMUST00000210667 640 ntBASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Gm18246-201ENSMUST00000221023 728 ntBASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Gm7775-201ENSMUST00000218871 853 ntBASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smg1Q8BKX6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Gm15824-201ENSMUST00000119516 955 ntBASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smg1Q8BKX6 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.93□□□□□ -0.34
Smg1Q8BKX6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smg1Q8BKX6 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms