Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Srrm4Q8BKA3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Srrm4Q8BKA3 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Srrm4Q8BKA3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Srrm4Q8BKA3 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.41□□□□□ -0.26
Srrm4Q8BKA3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Srrm4Q8BKA3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Srrm4Q8BKA3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Srrm4Q8BKA3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Gm18195-201ENSMUST00000207604 706 ntBASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Srrm4Q8BKA3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Srrm4Q8BKA3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Srrm4Q8BKA3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Srrm4Q8BKA3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Srrm4Q8BKA3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Gm6089-201ENSMUST00000197666 938 ntBASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Srrm4Q8BKA3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Srrm4Q8BKA3 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.38□□□□□ -0.27
Srrm4Q8BKA3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Srrm4Q8BKA3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Srrm4Q8BKA3 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Srrm4Q8BKA3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Srrm4Q8BKA3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Srrm4Q8BKA3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Srrm4Q8BKA3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Srrm4Q8BKA3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Srrm4Q8BKA3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Srrm4Q8BKA3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Srrm4Q8BKA3 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.38□□□□□ -0.27
Srrm4Q8BKA3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Srrm4Q8BKA3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Srrm4Q8BKA3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.38□□□□□ -0.27
Srrm4Q8BKA3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Srrm4Q8BKA3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Srrm4Q8BKA3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.38□□□□□ -0.27
Srrm4Q8BKA3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Srrm4Q8BKA3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Srrm4Q8BKA3 Gm10060-201ENSMUST00000212002 111 ntBASIC13.38□□□□□ -0.27
Srrm4Q8BKA3 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.38□□□□□ -0.27
Srrm4Q8BKA3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Srrm4Q8BKA3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms