Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcal1Q8BJL0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcal1Q8BJL0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.41■□□□□ 0.22
Smarcal1Q8BJL0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.41■□□□□ 0.22
Smarcal1Q8BJL0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Smarcal1Q8BJL0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcal1Q8BJL0 Gm18057-201ENSMUST00000208220 503 ntBASIC16.41■□□□□ 0.22
Smarcal1Q8BJL0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcal1Q8BJL0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcal1Q8BJL0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcal1Q8BJL0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Smarcal1Q8BJL0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcal1Q8BJL0 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.41■□□□□ 0.22
Smarcal1Q8BJL0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcal1Q8BJL0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcal1Q8BJL0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcal1Q8BJL0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcal1Q8BJL0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Smarcal1Q8BJL0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcal1Q8BJL0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcal1Q8BJL0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcal1Q8BJL0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 Gm43125-201ENSMUST00000201724 730 ntBASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcal1Q8BJL0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Smarcal1Q8BJL0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Smarcal1Q8BJL0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Smarcal1Q8BJL0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcal1Q8BJL0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms