Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Scn3bQ8BHK2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Gm12134-201ENSMUST00000122109 520 ntBASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3bQ8BHK2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Scn3bQ8BHK2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3bQ8BHK2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Scn3bQ8BHK2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.37□□□□□ -0.11
Scn3bQ8BHK2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3bQ8BHK2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3bQ8BHK2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3bQ8BHK2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3bQ8BHK2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3bQ8BHK2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Scn3bQ8BHK2 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3bQ8BHK2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.37□□□□□ -0.11
Scn3bQ8BHK2 Gm7213-201ENSMUST00000215977 950 ntBASIC14.37□□□□□ -0.11
Scn3bQ8BHK2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3bQ8BHK2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3bQ8BHK2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3bQ8BHK2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3bQ8BHK2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3bQ8BHK2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms