Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc5a7Q8BGY9 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Slc5a7Q8BGY9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc5a7Q8BGY9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc5a7Q8BGY9 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.57□□□□□ -0.24
Slc5a7Q8BGY9 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.57□□□□□ -0.24
Slc5a7Q8BGY9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Slc5a7Q8BGY9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc5a7Q8BGY9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Slc5a7Q8BGY9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc5a7Q8BGY9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Slc5a7Q8BGY9 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc5a7Q8BGY9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Slc5a7Q8BGY9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Gm12441-201ENSMUST00000121806 588 ntBASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Slc5a7Q8BGY9 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Gm10566-201ENSMUST00000086739 996 ntBASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc5a7Q8BGY9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Gm12527-201ENSMUST00000117967 564 ntBASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Gm27463-201ENSMUST00000183569 57 ntBASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 Gm7367-201ENSMUST00000057611 492 ntBASIC13.54□□□□□ -0.24
Slc5a7Q8BGY9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms