Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Gm10499-201ENSMUST00000174094 934 ntBASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4dQ8BGV9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Gm1401-201ENSMUST00000122048 772 ntBASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Gm44771-201ENSMUST00000206975 626 ntBASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4dQ8BGV9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4dQ8BGV9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms