Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Gm22697-201ENSMUST00000175194 63 ntBASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Trim6Q8BGE7 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Gm18101-201ENSMUST00000215769 548 ntBASIC16.44■□□□□ 0.22
Trim6Q8BGE7 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim6Q8BGE7 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim6Q8BGE7 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trim6Q8BGE7 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Trim6Q8BGE7 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim6Q8BGE7 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim6Q8BGE7 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim6Q8BGE7 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim6Q8BGE7 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim6Q8BGE7 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim6Q8BGE7 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.43■□□□□ 0.22
Trim6Q8BGE7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim6Q8BGE7 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim6Q8BGE7 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim6Q8BGE7 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim6Q8BGE7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim6Q8BGE7 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim6Q8BGE7 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim6Q8BGE7 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim6Q8BGE7 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim6Q8BGE7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Gm6257-201ENSMUST00000163864 910 ntBASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms