Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.24■□□□□ 0.03
Ubp1Q811S7 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.24■□□□□ 0.03
Ubp1Q811S7 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubp1Q811S7 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubp1Q811S7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubp1Q811S7 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubp1Q811S7 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.24■□□□□ 0.03
Ubp1Q811S7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubp1Q811S7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubp1Q811S7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.24■□□□□ 0.03
Ubp1Q811S7 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ubp1Q811S7 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ubp1Q811S7 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubp1Q811S7 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubp1Q811S7 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubp1Q811S7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.23■□□□□ 0.03
Ubp1Q811S7 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Ubp1Q811S7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubp1Q811S7 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.23■□□□□ 0.03
Ubp1Q811S7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubp1Q811S7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
Ubp1Q811S7 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ubp1Q811S7 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ubp1Q811S7 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.23■□□□□ 0.03
Ubp1Q811S7 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ubp1Q811S7 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.23■□□□□ 0.03
Ubp1Q811S7 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.23■□□□□ 0.03
Ubp1Q811S7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubp1Q811S7 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubp1Q811S7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubp1Q811S7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubp1Q811S7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubp1Q811S7 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ubp1Q811S7 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubp1Q811S7 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubp1Q811S7 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ubp1Q811S7 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubp1Q811S7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ubp1Q811S7 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ubp1Q811S7 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubp1Q811S7 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubp1Q811S7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Ubp1Q811S7 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubp1Q811S7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubp1Q811S7 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ubp1Q811S7 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubp1Q811S7 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubp1Q811S7 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ubp1Q811S7 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Ubp1Q811S7 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Ubp1Q811S7 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubp1Q811S7 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.22■□□□□ 0.03
Ubp1Q811S7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubp1Q811S7 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ubp1Q811S7 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubp1Q811S7 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubp1Q811S7 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ubp1Q811S7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ubp1Q811S7 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubp1Q811S7 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubp1Q811S7 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubp1Q811S7 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Ubp1Q811S7 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubp1Q811S7 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubp1Q811S7 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.21■□□□□ 0.03
Ubp1Q811S7 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Ubp1Q811S7 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubp1Q811S7 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.21■□□□□ 0.03
Ubp1Q811S7 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ubp1Q811S7 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.21■□□□□ 0.03
Ubp1Q811S7 Gm10060-201ENSMUST00000212002 111 ntBASIC15.21■□□□□ 0.03
Ubp1Q811S7 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.21■□□□□ 0.03
Ubp1Q811S7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.21■□□□□ 0.03
Ubp1Q811S7 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubp1Q811S7 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ubp1Q811S7 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Ubp1Q811S7 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ubp1Q811S7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ubp1Q811S7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.21■□□□□ 0.02
Ubp1Q811S7 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Ubp1Q811S7 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ubp1Q811S7 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubp1Q811S7 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubp1Q811S7 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ubp1Q811S7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ubp1Q811S7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ubp1Q811S7 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubp1Q811S7 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubp1Q811S7 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubp1Q811S7 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubp1Q811S7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Ubp1Q811S7 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.2■□□□□ 0.02
Ubp1Q811S7 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubp1Q811S7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ubp1Q811S7 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ubp1Q811S7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubp1Q811S7 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ubp1Q811S7 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Ubp1Q811S7 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ubp1Q811S7 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms