Protein–RNA interactions for Protein: Q80ZS5

Cldn34b3, Claudin 34B3, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn34b3Q80ZS5 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cldn34b3Q80ZS5 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn34b3Q80ZS5 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn34b3Q80ZS5 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.37□□□□□ -0.11
Cldn34b3Q80ZS5 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn34b3Q80ZS5 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn34b3Q80ZS5 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn34b3Q80ZS5 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn34b3Q80ZS5 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn34b3Q80ZS5 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cldn34b3Q80ZS5 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cldn34b3Q80ZS5 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.37□□□□□ -0.11
Cldn34b3Q80ZS5 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.37□□□□□ -0.11
Cldn34b3Q80ZS5 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn34b3Q80ZS5 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Cldn34b3Q80ZS5 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.37□□□□□ -0.11
Cldn34b3Q80ZS5 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn34b3Q80ZS5 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 Mir8098-201ENSMUST00000184011 137 ntBASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 Gm6089-201ENSMUST00000197666 938 ntBASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn34b3Q80ZS5 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Gm28659-201ENSMUST00000188013 759 ntBASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Cldn34b3Q80ZS5 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b3Q80ZS5 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b3Q80ZS5 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b3Q80ZS5 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.34□□□□□ -0.11
Cldn34b3Q80ZS5 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b3Q80ZS5 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b3Q80ZS5 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cldn34b3Q80ZS5 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Cldn34b3Q80ZS5 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.34□□□□□ -0.11
Cldn34b3Q80ZS5 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b3Q80ZS5 Gm11452-201ENSMUST00000122376 690 ntBASIC14.34□□□□□ -0.11
Cldn34b3Q80ZS5 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.34□□□□□ -0.11
Cldn34b3Q80ZS5 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.34□□□□□ -0.11
Cldn34b3Q80ZS5 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.34□□□□□ -0.11
Cldn34b3Q80ZS5 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Cldn34b3Q80ZS5 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b3Q80ZS5 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b3Q80ZS5 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b3Q80ZS5 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b3Q80ZS5 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms