Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trnp1Q80ZI1 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trnp1Q80ZI1 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.34■□□□□ 0.37
Trnp1Q80ZI1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trnp1Q80ZI1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trnp1Q80ZI1 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trnp1Q80ZI1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trnp1Q80ZI1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trnp1Q80ZI1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trnp1Q80ZI1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trnp1Q80ZI1 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trnp1Q80ZI1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trnp1Q80ZI1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.33■□□□□ 0.37
Trnp1Q80ZI1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trnp1Q80ZI1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trnp1Q80ZI1 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trnp1Q80ZI1 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trnp1Q80ZI1 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trnp1Q80ZI1 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Trnp1Q80ZI1 Gm27533-201ENSMUST00000183800 152 ntBASIC17.33■□□□□ 0.36
Trnp1Q80ZI1 Gm27920-201ENSMUST00000183953 96 ntBASIC17.33■□□□□ 0.36
Trnp1Q80ZI1 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trnp1Q80ZI1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trnp1Q80ZI1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trnp1Q80ZI1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trnp1Q80ZI1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trnp1Q80ZI1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trnp1Q80ZI1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Trnp1Q80ZI1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trnp1Q80ZI1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trnp1Q80ZI1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trnp1Q80ZI1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trnp1Q80ZI1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trnp1Q80ZI1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trnp1Q80ZI1 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.32■□□□□ 0.36
Trnp1Q80ZI1 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.32■□□□□ 0.36
Trnp1Q80ZI1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trnp1Q80ZI1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trnp1Q80ZI1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trnp1Q80ZI1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.32■□□□□ 0.36
Trnp1Q80ZI1 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trnp1Q80ZI1 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17.32■□□□□ 0.36
Trnp1Q80ZI1 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trnp1Q80ZI1 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trnp1Q80ZI1 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trnp1Q80ZI1 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.32■□□□□ 0.36
Trnp1Q80ZI1 Gm18187-201ENSMUST00000196476 984 ntBASIC17.32■□□□□ 0.36
Trnp1Q80ZI1 Gm44344-201ENSMUST00000200287 129 ntBASIC17.32■□□□□ 0.36
Trnp1Q80ZI1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trnp1Q80ZI1 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trnp1Q80ZI1 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Trnp1Q80ZI1 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trnp1Q80ZI1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trnp1Q80ZI1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trnp1Q80ZI1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trnp1Q80ZI1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trnp1Q80ZI1 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trnp1Q80ZI1 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC17.31■□□□□ 0.36
Trnp1Q80ZI1 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC17.31■□□□□ 0.36
Trnp1Q80ZI1 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trnp1Q80ZI1 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trnp1Q80ZI1 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trnp1Q80ZI1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trnp1Q80ZI1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trnp1Q80ZI1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.31■□□□□ 0.36
Trnp1Q80ZI1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trnp1Q80ZI1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trnp1Q80ZI1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trnp1Q80ZI1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trnp1Q80ZI1 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.31■□□□□ 0.36
Trnp1Q80ZI1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trnp1Q80ZI1 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.3■□□□□ 0.36
Trnp1Q80ZI1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
Trnp1Q80ZI1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trnp1Q80ZI1 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trnp1Q80ZI1 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.3■□□□□ 0.36
Trnp1Q80ZI1 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.3■□□□□ 0.36
Trnp1Q80ZI1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.3■□□□□ 0.36
Trnp1Q80ZI1 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trnp1Q80ZI1 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17.3■□□□□ 0.36
Trnp1Q80ZI1 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.3■□□□□ 0.36
Trnp1Q80ZI1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trnp1Q80ZI1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trnp1Q80ZI1 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.3■□□□□ 0.36
Trnp1Q80ZI1 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trnp1Q80ZI1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trnp1Q80ZI1 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trnp1Q80ZI1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trnp1Q80ZI1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trnp1Q80ZI1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trnp1Q80ZI1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trnp1Q80ZI1 Gm28631-201ENSMUST00000190740 334 ntBASIC17.29■□□□□ 0.36
Trnp1Q80ZI1 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17.29■□□□□ 0.36
Trnp1Q80ZI1 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trnp1Q80ZI1 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trnp1Q80ZI1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trnp1Q80ZI1 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trnp1Q80ZI1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trnp1Q80ZI1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trnp1Q80ZI1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms