Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc116Q80X53 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ccdc116Q80X53 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc116Q80X53 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc116Q80X53 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc116Q80X53 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc116Q80X53 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.15■□□□□ 0.02
Ccdc116Q80X53 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc116Q80X53 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc116Q80X53 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc116Q80X53 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc116Q80X53 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc116Q80X53 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc116Q80X53 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc116Q80X53 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc116Q80X53 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.15■□□□□ 0.02
Ccdc116Q80X53 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc116Q80X53 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc116Q80X53 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc116Q80X53 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc116Q80X53 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc116Q80X53 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc116Q80X53 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc116Q80X53 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc116Q80X53 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Ank2-226ENSMUST00000189368 339 ntBASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc116Q80X53 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc116Q80X53 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc116Q80X53 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc116Q80X53 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc116Q80X53 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ccdc116Q80X53 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc116Q80X53 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc116Q80X53 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc116Q80X53 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc116Q80X53 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.13■□□□□ 0.01
Ccdc116Q80X53 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc116Q80X53 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.13■□□□□ 0.01
Ccdc116Q80X53 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc116Q80X53 Gm19164-201ENSMUST00000210667 640 ntBASIC15.13■□□□□ 0.01
Ccdc116Q80X53 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.13■□□□□ 0.01
Ccdc116Q80X53 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc116Q80X53 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ccdc116Q80X53 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc116Q80X53 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc116Q80X53 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc116Q80X53 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc116Q80X53 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Ccdc116Q80X53 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.13■□□□□ 0.01
Ccdc116Q80X53 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc116Q80X53 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc116Q80X53 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc116Q80X53 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc116Q80X53 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc116Q80X53 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc116Q80X53 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc116Q80X53 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc116Q80X53 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc116Q80X53 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc116Q80X53 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc116Q80X53 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc116Q80X53 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc116Q80X53 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc116Q80X53 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.12■□□□□ 0.01
Ccdc116Q80X53 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc116Q80X53 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc116Q80X53 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms