Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnrc18Q80WC3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnrc18Q80WC3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnrc18Q80WC3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Tnrc18Q80WC3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnrc18Q80WC3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnrc18Q80WC3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnrc18Q80WC3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnrc18Q80WC3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Tnrc18Q80WC3 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.18■□□□□ 0.02
Tnrc18Q80WC3 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.18■□□□□ 0.02
Tnrc18Q80WC3 Gm11918-201ENSMUST00000121660 179 ntBASIC15.18■□□□□ 0.02
Tnrc18Q80WC3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tnrc18Q80WC3 Mir1938-201ENSMUST00000158746 100 ntBASIC15.18■□□□□ 0.02
Tnrc18Q80WC3 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.18■□□□□ 0.02
Tnrc18Q80WC3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tnrc18Q80WC3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnrc18Q80WC3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnrc18Q80WC3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnrc18Q80WC3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
Tnrc18Q80WC3 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnrc18Q80WC3 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tnrc18Q80WC3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.17■□□□□ 0.02
Tnrc18Q80WC3 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tnrc18Q80WC3 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnrc18Q80WC3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnrc18Q80WC3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnrc18Q80WC3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnrc18Q80WC3 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnrc18Q80WC3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnrc18Q80WC3 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.17■□□□□ 0.02
Tnrc18Q80WC3 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.17■□□□□ 0.02
Tnrc18Q80WC3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Tnrc18Q80WC3 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.17■□□□□ 0.02
Tnrc18Q80WC3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnrc18Q80WC3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnrc18Q80WC3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnrc18Q80WC3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnrc18Q80WC3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Tnrc18Q80WC3 Gm3436-201ENSMUST00000179930 840 ntBASIC15.16■□□□□ 0.02
Tnrc18Q80WC3 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.16■□□□□ 0.02
Tnrc18Q80WC3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnrc18Q80WC3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnrc18Q80WC3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnrc18Q80WC3 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnrc18Q80WC3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.16■□□□□ 0.02
Tnrc18Q80WC3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Tnrc18Q80WC3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnrc18Q80WC3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.16■□□□□ 0.02
Tnrc18Q80WC3 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.16■□□□□ 0.02
Tnrc18Q80WC3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnrc18Q80WC3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Tnrc18Q80WC3 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15.16■□□□□ 0.02
Tnrc18Q80WC3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnrc18Q80WC3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnrc18Q80WC3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnrc18Q80WC3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Tnrc18Q80WC3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnrc18Q80WC3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnrc18Q80WC3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnrc18Q80WC3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tnrc18Q80WC3 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.15■□□□□ 0.02
Tnrc18Q80WC3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tnrc18Q80WC3 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnrc18Q80WC3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Tnrc18Q80WC3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnrc18Q80WC3 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnrc18Q80WC3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tnrc18Q80WC3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.15■□□□□ 0.02
Tnrc18Q80WC3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnrc18Q80WC3 Gm20445-201ENSMUST00000061905 565 ntBASIC15.15■□□□□ 0.02
Tnrc18Q80WC3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnrc18Q80WC3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnrc18Q80WC3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnrc18Q80WC3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnrc18Q80WC3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tnrc18Q80WC3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnrc18Q80WC3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnrc18Q80WC3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Tnrc18Q80WC3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnrc18Q80WC3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tnrc18Q80WC3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnrc18Q80WC3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Tnrc18Q80WC3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tnrc18Q80WC3 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.14■□□□□ 0.01
Tnrc18Q80WC3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.14■□□□□ 0.01
Tnrc18Q80WC3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnrc18Q80WC3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnrc18Q80WC3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tnrc18Q80WC3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnrc18Q80WC3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnrc18Q80WC3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tnrc18Q80WC3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnrc18Q80WC3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnrc18Q80WC3 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Tnrc18Q80WC3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Tnrc18Q80WC3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnrc18Q80WC3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tnrc18Q80WC3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnrc18Q80WC3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms