Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3tc2Q80VA5 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.81■□□□□ 0.28
Sh3tc2Q80VA5 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3tc2Q80VA5 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3tc2Q80VA5 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3tc2Q80VA5 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sh3tc2Q80VA5 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3tc2Q80VA5 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3tc2Q80VA5 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3tc2Q80VA5 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Sh3tc2Q80VA5 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3tc2Q80VA5 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3tc2Q80VA5 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3tc2Q80VA5 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3tc2Q80VA5 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.81■□□□□ 0.28
Sh3tc2Q80VA5 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3tc2Q80VA5 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3tc2Q80VA5 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3tc2Q80VA5 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3tc2Q80VA5 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3tc2Q80VA5 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3tc2Q80VA5 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.81■□□□□ 0.28
Sh3tc2Q80VA5 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Gm20949-201ENSMUST00000206478 952 ntBASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3tc2Q80VA5 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Gm15358-201ENSMUST00000119249 520 ntBASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Gm44335-201ENSMUST00000196879 141 ntBASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Gm9682-201ENSMUST00000197505 556 ntBASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Gm44297-201ENSMUST00000198304 141 ntBASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Gm44346-201ENSMUST00000198851 141 ntBASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3tc2Q80VA5 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3tc2Q80VA5 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3tc2Q80VA5 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3tc2Q80VA5 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3tc2Q80VA5 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3tc2Q80VA5 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3tc2Q80VA5 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms