Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim62Q80V85 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim62Q80V85 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim62Q80V85 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.98■□□□□ 0.15
Trim62Q80V85 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim62Q80V85 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trim62Q80V85 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim62Q80V85 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim62Q80V85 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim62Q80V85 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trim62Q80V85 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trim62Q80V85 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.98■□□□□ 0.15
Trim62Q80V85 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trim62Q80V85 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.98■□□□□ 0.15
Trim62Q80V85 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.98■□□□□ 0.15
Trim62Q80V85 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.98■□□□□ 0.15
Trim62Q80V85 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trim62Q80V85 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim62Q80V85 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim62Q80V85 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim62Q80V85 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim62Q80V85 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trim62Q80V85 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim62Q80V85 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Trim62Q80V85 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim62Q80V85 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.97■□□□□ 0.15
Trim62Q80V85 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim62Q80V85 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim62Q80V85 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim62Q80V85 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim62Q80V85 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim62Q80V85 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim62Q80V85 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trim62Q80V85 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.97■□□□□ 0.15
Trim62Q80V85 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim62Q80V85 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim62Q80V85 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim62Q80V85 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.97■□□□□ 0.15
Trim62Q80V85 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.97■□□□□ 0.15
Trim62Q80V85 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trim62Q80V85 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trim62Q80V85 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.97■□□□□ 0.15
Trim62Q80V85 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim62Q80V85 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trim62Q80V85 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.97■□□□□ 0.15
Trim62Q80V85 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.97■□□□□ 0.15
Trim62Q80V85 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trim62Q80V85 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim62Q80V85 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim62Q80V85 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim62Q80V85 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim62Q80V85 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim62Q80V85 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trim62Q80V85 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim62Q80V85 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim62Q80V85 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim62Q80V85 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.97■□□□□ 0.15
Trim62Q80V85 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim62Q80V85 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim62Q80V85 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trim62Q80V85 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim62Q80V85 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim62Q80V85 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim62Q80V85 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim62Q80V85 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.96■□□□□ 0.15
Trim62Q80V85 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trim62Q80V85 Prob1-201ENSMUST00000097619 3021 ntBASIC15.96■□□□□ 0.15
Trim62Q80V85 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Trim62Q80V85 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim62Q80V85 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim62Q80V85 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.96■□□□□ 0.15
Trim62Q80V85 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim62Q80V85 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trim62Q80V85 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim62Q80V85 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim62Q80V85 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Trim62Q80V85 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trim62Q80V85 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.96■□□□□ 0.14
Trim62Q80V85 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Trim62Q80V85 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim62Q80V85 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trim62Q80V85 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim62Q80V85 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trim62Q80V85 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.95■□□□□ 0.14
Trim62Q80V85 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim62Q80V85 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.95■□□□□ 0.14
Trim62Q80V85 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.95■□□□□ 0.14
Trim62Q80V85 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.95■□□□□ 0.14
Trim62Q80V85 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.95■□□□□ 0.14
Trim62Q80V85 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim62Q80V85 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim62Q80V85 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trim62Q80V85 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trim62Q80V85 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim62Q80V85 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trim62Q80V85 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trim62Q80V85 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trim62Q80V85 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim62Q80V85 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim62Q80V85 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms