Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Mir3113-201ENSMUST00000175478 76 ntBASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Gm2756-201ENSMUST00000195851 400 ntBASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdh19Q80TF3 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Gm6736-201ENSMUST00000166583 948 ntBASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Gm27300-201ENSMUST00000184085 97 ntBASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Gm27335-201ENSMUST00000184758 97 ntBASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh19Q80TF3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.14■□□□□ 0.01
Pcdh19Q80TF3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms