Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ShprhQ7TPQ3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ShprhQ7TPQ3 Gm15321-201ENSMUST00000121290 288 ntBASIC21.63■■□□□ 1.05
ShprhQ7TPQ3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC21.63■■□□□ 1.05
ShprhQ7TPQ3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ShprhQ7TPQ3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ShprhQ7TPQ3 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ShprhQ7TPQ3 Celf4-206ENSMUST00000224553 1729 ntBASIC21.63■■□□□ 1.05
ShprhQ7TPQ3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ShprhQ7TPQ3 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ShprhQ7TPQ3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ShprhQ7TPQ3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC21.63■■□□□ 1.05
ShprhQ7TPQ3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
ShprhQ7TPQ3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
ShprhQ7TPQ3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ShprhQ7TPQ3 Gm5479-201ENSMUST00000160578 435 ntBASIC21.63■■□□□ 1.05
ShprhQ7TPQ3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC21.63■■□□□ 1.05
ShprhQ7TPQ3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC21.63■■□□□ 1.05
ShprhQ7TPQ3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
ShprhQ7TPQ3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ShprhQ7TPQ3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ShprhQ7TPQ3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ShprhQ7TPQ3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ShprhQ7TPQ3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ShprhQ7TPQ3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
ShprhQ7TPQ3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
ShprhQ7TPQ3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
ShprhQ7TPQ3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ShprhQ7TPQ3 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
ShprhQ7TPQ3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC21.62■■□□□ 1.05
ShprhQ7TPQ3 AC130829.1-201ENSMUST00000221548 494 ntBASIC21.62■■□□□ 1.05
ShprhQ7TPQ3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ShprhQ7TPQ3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
ShprhQ7TPQ3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ShprhQ7TPQ3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ShprhQ7TPQ3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
ShprhQ7TPQ3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.61■■□□□ 1.05
ShprhQ7TPQ3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ShprhQ7TPQ3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ShprhQ7TPQ3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ShprhQ7TPQ3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ShprhQ7TPQ3 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ShprhQ7TPQ3 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
ShprhQ7TPQ3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC21.61■■□□□ 1.05
ShprhQ7TPQ3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ShprhQ7TPQ3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ShprhQ7TPQ3 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ShprhQ7TPQ3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ShprhQ7TPQ3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
ShprhQ7TPQ3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ShprhQ7TPQ3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ShprhQ7TPQ3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC21.61■■□□□ 1.05
ShprhQ7TPQ3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ShprhQ7TPQ3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
ShprhQ7TPQ3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ShprhQ7TPQ3 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC21.6■■□□□ 1.05
ShprhQ7TPQ3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC21.6■■□□□ 1.05
ShprhQ7TPQ3 AC124732.1-201ENSMUST00000221551 910 ntBASIC21.6■■□□□ 1.05
ShprhQ7TPQ3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ShprhQ7TPQ3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ShprhQ7TPQ3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ShprhQ7TPQ3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ShprhQ7TPQ3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
ShprhQ7TPQ3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ShprhQ7TPQ3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ShprhQ7TPQ3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ShprhQ7TPQ3 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ShprhQ7TPQ3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ShprhQ7TPQ3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
ShprhQ7TPQ3 Syt7-204ENSMUST00000223586 1344 ntBASIC21.59■■□□□ 1.05
ShprhQ7TPQ3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ShprhQ7TPQ3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ShprhQ7TPQ3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
ShprhQ7TPQ3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ShprhQ7TPQ3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
ShprhQ7TPQ3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ShprhQ7TPQ3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ShprhQ7TPQ3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ShprhQ7TPQ3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC21.59■■□□□ 1.05
ShprhQ7TPQ3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
ShprhQ7TPQ3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC21.59■■□□□ 1.05
ShprhQ7TPQ3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ShprhQ7TPQ3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC21.59■■□□□ 1.05
ShprhQ7TPQ3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ShprhQ7TPQ3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
ShprhQ7TPQ3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ShprhQ7TPQ3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ShprhQ7TPQ3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ShprhQ7TPQ3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ShprhQ7TPQ3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ShprhQ7TPQ3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ShprhQ7TPQ3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ShprhQ7TPQ3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ShprhQ7TPQ3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.05
ShprhQ7TPQ3 Gm5566-201ENSMUST00000116118 459 ntBASIC21.58■■□□□ 1.05
ShprhQ7TPQ3 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ShprhQ7TPQ3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ShprhQ7TPQ3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ShprhQ7TPQ3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
ShprhQ7TPQ3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms