Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp3Q7TNH6 Gm8318-201ENSMUST00000182954 872 ntBASIC18.75■□□□□ 0.59
Nphp3Q7TNH6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp3Q7TNH6 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Nphp3Q7TNH6 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp3Q7TNH6 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp3Q7TNH6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp3Q7TNH6 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp3Q7TNH6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp3Q7TNH6 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp3Q7TNH6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp3Q7TNH6 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.75■□□□□ 0.59
Nphp3Q7TNH6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp3Q7TNH6 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp3Q7TNH6 Asic1-205ENSMUST00000228185 1818 ntBASIC18.75■□□□□ 0.59
Nphp3Q7TNH6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp3Q7TNH6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.75■□□□□ 0.59
Nphp3Q7TNH6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.75■□□□□ 0.59
Nphp3Q7TNH6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.75■□□□□ 0.59
Nphp3Q7TNH6 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp3Q7TNH6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp3Q7TNH6 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp3Q7TNH6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp3Q7TNH6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Gm10175-201ENSMUST00000086013 645 ntBASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Gm7787-201ENSMUST00000216858 688 ntBASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nphp3Q7TNH6 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Nphp3Q7TNH6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp3Q7TNH6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp3Q7TNH6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp3Q7TNH6 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.73■□□□□ 0.59
Nphp3Q7TNH6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp3Q7TNH6 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp3Q7TNH6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Nphp3Q7TNH6 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp3Q7TNH6 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp3Q7TNH6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp3Q7TNH6 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp3Q7TNH6 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp3Q7TNH6 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp3Q7TNH6 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Nphp3Q7TNH6 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp3Q7TNH6 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp3Q7TNH6 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.73■□□□□ 0.59
Nphp3Q7TNH6 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.73■□□□□ 0.59
Nphp3Q7TNH6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp3Q7TNH6 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Nphp3Q7TNH6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.72■□□□□ 0.59
Nphp3Q7TNH6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp3Q7TNH6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp3Q7TNH6 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp3Q7TNH6 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp3Q7TNH6 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.72■□□□□ 0.59
Nphp3Q7TNH6 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Nphp3Q7TNH6 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp3Q7TNH6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp3Q7TNH6 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp3Q7TNH6 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp3Q7TNH6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp3Q7TNH6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp3Q7TNH6 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp3Q7TNH6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp3Q7TNH6 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Nphp3Q7TNH6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nphp3Q7TNH6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nphp3Q7TNH6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nphp3Q7TNH6 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Nphp3Q7TNH6 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nphp3Q7TNH6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nphp3Q7TNH6 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.71■□□□□ 0.59
Nphp3Q7TNH6 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nphp3Q7TNH6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nphp3Q7TNH6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nphp3Q7TNH6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms