Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Snrnp40Q6PE01 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Snrnp40Q6PE01 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Snrnp40Q6PE01 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Snrnp40Q6PE01 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Snrnp40Q6PE01 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Snrnp40Q6PE01 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Gm13223-201ENSMUST00000118609 747 ntBASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Gm27618-201ENSMUST00000183671 60 ntBASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Snrnp40Q6PE01 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Gm14722-201ENSMUST00000118943 689 ntBASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Gm15693-201ENSMUST00000120470 637 ntBASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Gm43438-201ENSMUST00000198133 379 ntBASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Snrnp40Q6PE01 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Gm6415-201ENSMUST00000118488 348 ntBASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Gm17837-201ENSMUST00000186435 985 ntBASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms