Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Dancr-204ENSMUST00000132389 2347 ntBASIC19.97■□□□□ 0.79
Chd4Q6PDQ2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd4Q6PDQ2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
Chd4Q6PDQ2 Celf4-206ENSMUST00000224553 1729 ntBASIC19.95■□□□□ 0.78
Chd4Q6PDQ2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.95■□□□□ 0.78
Chd4Q6PDQ2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd4Q6PDQ2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd4Q6PDQ2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd4Q6PDQ2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC19.95■□□□□ 0.78
Chd4Q6PDQ2 Gm5866-201ENSMUST00000177881 973 ntBASIC19.95■□□□□ 0.78
Chd4Q6PDQ2 Gm27306-201ENSMUST00000183970 107 ntBASIC19.95■□□□□ 0.78
Chd4Q6PDQ2 AC125206.2-201ENSMUST00000217454 574 ntBASIC19.95■□□□□ 0.78
Chd4Q6PDQ2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd4Q6PDQ2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd4Q6PDQ2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chd4Q6PDQ2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd4Q6PDQ2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd4Q6PDQ2 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chd4Q6PDQ2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chd4Q6PDQ2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Chd4Q6PDQ2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Chd4Q6PDQ2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chd4Q6PDQ2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Chd4Q6PDQ2 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chd4Q6PDQ2 Gm7730-201ENSMUST00000212486 454 ntBASIC19.94■□□□□ 0.78
Chd4Q6PDQ2 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chd4Q6PDQ2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC19.94■□□□□ 0.78
Chd4Q6PDQ2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Chd4Q6PDQ2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chd4Q6PDQ2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chd4Q6PDQ2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chd4Q6PDQ2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chd4Q6PDQ2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chd4Q6PDQ2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chd4Q6PDQ2 Gm13823-201ENSMUST00000119930 345 ntBASIC19.94■□□□□ 0.78
Chd4Q6PDQ2 Gm12151-201ENSMUST00000121374 290 ntBASIC19.94■□□□□ 0.78
Chd4Q6PDQ2 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chd4Q6PDQ2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Chd4Q6PDQ2 Gm42466-201ENSMUST00000202099 1301 ntBASIC19.94■□□□□ 0.78
Chd4Q6PDQ2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd4Q6PDQ2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd4Q6PDQ2 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chd4Q6PDQ2 Mir7684-201ENSMUST00000183858 60 ntBASIC19.93■□□□□ 0.78
Chd4Q6PDQ2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chd4Q6PDQ2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chd4Q6PDQ2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd4Q6PDQ2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd4Q6PDQ2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd4Q6PDQ2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.93■□□□□ 0.78
Chd4Q6PDQ2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd4Q6PDQ2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd4Q6PDQ2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC19.93■□□□□ 0.78
Chd4Q6PDQ2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd4Q6PDQ2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 AC159621.2-201ENSMUST00000223519 1326 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Gm29310-201ENSMUST00000185468 696 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Gm21825-201ENSMUST00000185728 696 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Gm29109-201ENSMUST00000185895 696 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Gm21896-201ENSMUST00000186520 696 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Gm21873-201ENSMUST00000186728 696 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Gm21794-201ENSMUST00000187056 696 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Gm21880-201ENSMUST00000187275 696 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Gm21826-201ENSMUST00000187451 696 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Gm21198-201ENSMUST00000188393 696 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Gm21749-201ENSMUST00000189343 696 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Gm21901-201ENSMUST00000189568 696 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Gm29424-201ENSMUST00000189716 696 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Gm28599-201ENSMUST00000189838 694 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Gm21867-201ENSMUST00000189917 696 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Gm29269-201ENSMUST00000190087 696 ntBASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms