Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcc2Q6PDG5 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.01■□□□□ 0.47
Smarcc2Q6PDG5 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcc2Q6PDG5 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcc2Q6PDG5 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcc2Q6PDG5 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Smarcc2Q6PDG5 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.01■□□□□ 0.47
Smarcc2Q6PDG5 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcc2Q6PDG5 Gm14722-201ENSMUST00000118943 689 ntBASIC18.01■□□□□ 0.47
Smarcc2Q6PDG5 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcc2Q6PDG5 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.01■□□□□ 0.47
Smarcc2Q6PDG5 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.01■□□□□ 0.47
Smarcc2Q6PDG5 Gm44771-201ENSMUST00000206975 626 ntBASIC18.01■□□□□ 0.47
Smarcc2Q6PDG5 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.01■□□□□ 0.47
Smarcc2Q6PDG5 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Smarcc2Q6PDG5 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcc2Q6PDG5 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcc2Q6PDG5 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcc2Q6PDG5 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcc2Q6PDG5 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcc2Q6PDG5 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcc2Q6PDG5 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcc2Q6PDG5 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.01■□□□□ 0.47
Smarcc2Q6PDG5 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Smarcc2Q6PDG5 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smarcc2Q6PDG5 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Smarcc2Q6PDG5 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Smarcc2Q6PDG5 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Smarcc2Q6PDG5 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
Smarcc2Q6PDG5 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18■□□□□ 0.47
Smarcc2Q6PDG5 Gm19164-201ENSMUST00000210667 640 ntBASIC18■□□□□ 0.47
Smarcc2Q6PDG5 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smarcc2Q6PDG5 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18■□□□□ 0.47
Smarcc2Q6PDG5 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Smarcc2Q6PDG5 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18■□□□□ 0.47
Smarcc2Q6PDG5 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smarcc2Q6PDG5 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Smarcc2Q6PDG5 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Smarcc2Q6PDG5 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 Gm18733-201ENSMUST00000173950 856 ntBASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcc2Q6PDG5 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Gm25990-201ENSMUST00000102440 86 ntBASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Gm10060-201ENSMUST00000212002 111 ntBASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcc2Q6PDG5 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Smarcc2Q6PDG5 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms