Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.19■□□□□ 0.18
Hmgb4Q6P8W9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgb4Q6P8W9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgb4Q6P8W9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgb4Q6P8W9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Hmgb4Q6P8W9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgb4Q6P8W9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgb4Q6P8W9 Gm5682-201ENSMUST00000173402 505 ntBASIC16.19■□□□□ 0.18
Hmgb4Q6P8W9 Gm24513-201ENSMUST00000174964 138 ntBASIC16.19■□□□□ 0.18
Hmgb4Q6P8W9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgb4Q6P8W9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgb4Q6P8W9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgb4Q6P8W9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgb4Q6P8W9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgb4Q6P8W9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgb4Q6P8W9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgb4Q6P8W9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgb4Q6P8W9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Hmgb4Q6P8W9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgb4Q6P8W9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Hmgb4Q6P8W9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Hmgb4Q6P8W9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgb4Q6P8W9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.19■□□□□ 0.18
Hmgb4Q6P8W9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.18■□□□□ 0.18
Hmgb4Q6P8W9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Hmgb4Q6P8W9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgb4Q6P8W9 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Hmgb4Q6P8W9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Hmgb4Q6P8W9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgb4Q6P8W9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgb4Q6P8W9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgb4Q6P8W9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgb4Q6P8W9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgb4Q6P8W9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Hmgb4Q6P8W9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.18■□□□□ 0.18
Hmgb4Q6P8W9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Hmgb4Q6P8W9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.18■□□□□ 0.18
Hmgb4Q6P8W9 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.18■□□□□ 0.18
Hmgb4Q6P8W9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.18■□□□□ 0.18
Hmgb4Q6P8W9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgb4Q6P8W9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Hmgb4Q6P8W9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgb4Q6P8W9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgb4Q6P8W9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.18■□□□□ 0.18
Hmgb4Q6P8W9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgb4Q6P8W9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Hmgb4Q6P8W9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgb4Q6P8W9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Hmgb4Q6P8W9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Gm23935-201ENSMUST00000102303 57 ntBASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Gm24270-201ENSMUST00000102326 57 ntBASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Gm24245-201ENSMUST00000157318 57 ntBASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Gm2756-201ENSMUST00000195851 400 ntBASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Grk6-207ENSMUST00000225925 2769 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms