Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac4Q6NZM9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac4Q6NZM9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac4Q6NZM9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.3■□□□□ 0.36
Hdac4Q6NZM9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac4Q6NZM9 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac4Q6NZM9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.3■□□□□ 0.36
Hdac4Q6NZM9 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac4Q6NZM9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac4Q6NZM9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac4Q6NZM9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac4Q6NZM9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac4Q6NZM9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac4Q6NZM9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Hdac4Q6NZM9 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.29■□□□□ 0.36
Hdac4Q6NZM9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.29■□□□□ 0.36
Hdac4Q6NZM9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.29■□□□□ 0.36
Hdac4Q6NZM9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.29■□□□□ 0.36
Hdac4Q6NZM9 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.29■□□□□ 0.36
Hdac4Q6NZM9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.29■□□□□ 0.36
Hdac4Q6NZM9 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.29■□□□□ 0.36
Hdac4Q6NZM9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac4Q6NZM9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.29■□□□□ 0.36
Hdac4Q6NZM9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Hdac4Q6NZM9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Hdac4Q6NZM9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Hdac4Q6NZM9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Hdac4Q6NZM9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac4Q6NZM9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Hdac4Q6NZM9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac4Q6NZM9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac4Q6NZM9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac4Q6NZM9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Hdac4Q6NZM9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac4Q6NZM9 Gm24589-201ENSMUST00000116692 94 ntBASIC17.28■□□□□ 0.36
Hdac4Q6NZM9 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac4Q6NZM9 Gm8318-201ENSMUST00000182954 872 ntBASIC17.28■□□□□ 0.36
Hdac4Q6NZM9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.28■□□□□ 0.36
Hdac4Q6NZM9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.28■□□□□ 0.36
Hdac4Q6NZM9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac4Q6NZM9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac4Q6NZM9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac4Q6NZM9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac4Q6NZM9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac4Q6NZM9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Hdac4Q6NZM9 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.28■□□□□ 0.36
Hdac4Q6NZM9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac4Q6NZM9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac4Q6NZM9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac4Q6NZM9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac4Q6NZM9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac4Q6NZM9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac4Q6NZM9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac4Q6NZM9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Hdac4Q6NZM9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac4Q6NZM9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac4Q6NZM9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.27■□□□□ 0.36
Hdac4Q6NZM9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac4Q6NZM9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Hdac4Q6NZM9 Gm17971-201ENSMUST00000190239 806 ntBASIC17.27■□□□□ 0.36
Hdac4Q6NZM9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.27■□□□□ 0.36
Hdac4Q6NZM9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac4Q6NZM9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac4Q6NZM9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.27■□□□□ 0.36
Hdac4Q6NZM9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac4Q6NZM9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac4Q6NZM9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac4Q6NZM9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hdac4Q6NZM9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hdac4Q6NZM9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hdac4Q6NZM9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hdac4Q6NZM9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hdac4Q6NZM9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac4Q6NZM9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.26■□□□□ 0.35
Hdac4Q6NZM9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac4Q6NZM9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac4Q6NZM9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac4Q6NZM9 Gm25990-201ENSMUST00000102440 86 ntBASIC17.26■□□□□ 0.35
Hdac4Q6NZM9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac4Q6NZM9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac4Q6NZM9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac4Q6NZM9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.26■□□□□ 0.35
Hdac4Q6NZM9 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.26■□□□□ 0.35
Hdac4Q6NZM9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac4Q6NZM9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac4Q6NZM9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac4Q6NZM9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac4Q6NZM9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac4Q6NZM9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac4Q6NZM9 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac4Q6NZM9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac4Q6NZM9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.26■□□□□ 0.35
Hdac4Q6NZM9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.26■□□□□ 0.35
Hdac4Q6NZM9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac4Q6NZM9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac4Q6NZM9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac4Q6NZM9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac4Q6NZM9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac4Q6NZM9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Hdac4Q6NZM9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms