Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.3■□□□□ 0.36
Tpm4Q6IRU2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Tpm4Q6IRU2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm4Q6IRU2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm4Q6IRU2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm4Q6IRU2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Tpm4Q6IRU2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm4Q6IRU2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Tpm4Q6IRU2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm4Q6IRU2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm4Q6IRU2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm4Q6IRU2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.3■□□□□ 0.36
Tpm4Q6IRU2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Tpm4Q6IRU2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm4Q6IRU2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm4Q6IRU2 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm4Q6IRU2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm4Q6IRU2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm4Q6IRU2 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Tpm4Q6IRU2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm4Q6IRU2 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm4Q6IRU2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm4Q6IRU2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm4Q6IRU2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm4Q6IRU2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpm4Q6IRU2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm4Q6IRU2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm4Q6IRU2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm4Q6IRU2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm4Q6IRU2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm4Q6IRU2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm4Q6IRU2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Tpm4Q6IRU2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm4Q6IRU2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Tpm4Q6IRU2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm4Q6IRU2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Tpm4Q6IRU2 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Tpm4Q6IRU2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Tpm4Q6IRU2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm4Q6IRU2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm4Q6IRU2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm4Q6IRU2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm4Q6IRU2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm4Q6IRU2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm4Q6IRU2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm4Q6IRU2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm4Q6IRU2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm4Q6IRU2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tpm4Q6IRU2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Tpm4Q6IRU2 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.28■□□□□ 0.36
Tpm4Q6IRU2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm4Q6IRU2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm4Q6IRU2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm4Q6IRU2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm4Q6IRU2 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm4Q6IRU2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Tpm4Q6IRU2 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.28■□□□□ 0.36
Tpm4Q6IRU2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Tpm4Q6IRU2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm4Q6IRU2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.28■□□□□ 0.36
Tpm4Q6IRU2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Tpm4Q6IRU2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Tpm4Q6IRU2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm4Q6IRU2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm4Q6IRU2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm4Q6IRU2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm4Q6IRU2 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm4Q6IRU2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Tpm4Q6IRU2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpm4Q6IRU2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.27■□□□□ 0.36
Tpm4Q6IRU2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tpm4Q6IRU2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tpm4Q6IRU2 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tpm4Q6IRU2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms