Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Krt39Q6IFX4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt39Q6IFX4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Krt39Q6IFX4 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt39Q6IFX4 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Krt39Q6IFX4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Krt39Q6IFX4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Krt39Q6IFX4 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt39Q6IFX4 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt39Q6IFX4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt39Q6IFX4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt39Q6IFX4 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt39Q6IFX4 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt39Q6IFX4 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt39Q6IFX4 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt39Q6IFX4 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Krt39Q6IFX4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt39Q6IFX4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt39Q6IFX4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt39Q6IFX4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt39Q6IFX4 Gm14859-201ENSMUST00000117752 357 ntBASIC17.1■□□□□ 0.33
Krt39Q6IFX4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.1■□□□□ 0.33
Krt39Q6IFX4 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt39Q6IFX4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Krt39Q6IFX4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.1■□□□□ 0.33
Krt39Q6IFX4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt39Q6IFX4 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt39Q6IFX4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt39Q6IFX4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt39Q6IFX4 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt39Q6IFX4 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt39Q6IFX4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Krt39Q6IFX4 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt39Q6IFX4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt39Q6IFX4 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Krt39Q6IFX4 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt39Q6IFX4 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt39Q6IFX4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt39Q6IFX4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Krt39Q6IFX4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Krt39Q6IFX4 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.09■□□□□ 0.33
Krt39Q6IFX4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Krt39Q6IFX4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt39Q6IFX4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Krt39Q6IFX4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.09■□□□□ 0.33
Krt39Q6IFX4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Krt39Q6IFX4 Gm21362-201ENSMUST00000194272 928 ntBASIC17.09■□□□□ 0.33
Krt39Q6IFX4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt39Q6IFX4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt39Q6IFX4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Krt39Q6IFX4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt39Q6IFX4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Krt39Q6IFX4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt39Q6IFX4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Krt39Q6IFX4 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt39Q6IFX4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.09■□□□□ 0.33
Krt39Q6IFX4 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Krt39Q6IFX4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.09■□□□□ 0.33
Krt39Q6IFX4 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Krt39Q6IFX4 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Krt39Q6IFX4 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Krt39Q6IFX4 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Krt39Q6IFX4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Krt39Q6IFX4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Krt39Q6IFX4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Krt39Q6IFX4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.08■□□□□ 0.32
Krt39Q6IFX4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt39Q6IFX4 Gm13312-201ENSMUST00000119631 718 ntBASIC17.08■□□□□ 0.32
Krt39Q6IFX4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Krt39Q6IFX4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.08■□□□□ 0.32
Krt39Q6IFX4 Gm45328-201ENSMUST00000210942 917 ntBASIC17.08■□□□□ 0.32
Krt39Q6IFX4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt39Q6IFX4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt39Q6IFX4 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Krt39Q6IFX4 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt39Q6IFX4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt39Q6IFX4 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt39Q6IFX4 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt39Q6IFX4 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt39Q6IFX4 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Krt39Q6IFX4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.07■□□□□ 0.32
Krt39Q6IFX4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt39Q6IFX4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt39Q6IFX4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Krt39Q6IFX4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Krt39Q6IFX4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Krt39Q6IFX4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt39Q6IFX4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Krt39Q6IFX4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt39Q6IFX4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt39Q6IFX4 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.07■□□□□ 0.32
Krt39Q6IFX4 Gm27704-201ENSMUST00000185094 107 ntBASIC17.07■□□□□ 0.32
Krt39Q6IFX4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.07■□□□□ 0.32
Krt39Q6IFX4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Krt39Q6IFX4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Krt39Q6IFX4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt39Q6IFX4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Krt39Q6IFX4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.07■□□□□ 0.32
Krt39Q6IFX4 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt39Q6IFX4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms