Protein–RNA interactions for Protein: Q6A026

Pds5a, Sister chromatid cohesion protein PDS5 homolog A, mousemouse

Predictions only

Length 1,332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5aQ6A026 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pds5aQ6A026 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
Pds5aQ6A026 Gm14140-201ENSMUST00000119999 995 ntBASIC16.61■□□□□ 0.25
Pds5aQ6A026 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pds5aQ6A026 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pds5aQ6A026 Gm27525-201ENSMUST00000184465 107 ntBASIC16.61■□□□□ 0.25
Pds5aQ6A026 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Pds5aQ6A026 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.61■□□□□ 0.25
Pds5aQ6A026 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pds5aQ6A026 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Pds5aQ6A026 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pds5aQ6A026 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pds5aQ6A026 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pds5aQ6A026 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
Pds5aQ6A026 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.61■□□□□ 0.25
Pds5aQ6A026 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pds5aQ6A026 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.61■□□□□ 0.25
Pds5aQ6A026 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pds5aQ6A026 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pds5aQ6A026 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pds5aQ6A026 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Pds5aQ6A026 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pds5aQ6A026 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pds5aQ6A026 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.6■□□□□ 0.25
Pds5aQ6A026 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pds5aQ6A026 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.6■□□□□ 0.25
Pds5aQ6A026 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pds5aQ6A026 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pds5aQ6A026 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pds5aQ6A026 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pds5aQ6A026 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Pds5aQ6A026 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pds5aQ6A026 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pds5aQ6A026 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.6■□□□□ 0.25
Pds5aQ6A026 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pds5aQ6A026 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pds5aQ6A026 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.6■□□□□ 0.25
Pds5aQ6A026 Gm7787-201ENSMUST00000216858 688 ntBASIC16.6■□□□□ 0.25
Pds5aQ6A026 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pds5aQ6A026 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pds5aQ6A026 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pds5aQ6A026 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pds5aQ6A026 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pds5aQ6A026 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pds5aQ6A026 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pds5aQ6A026 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pds5aQ6A026 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pds5aQ6A026 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pds5aQ6A026 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pds5aQ6A026 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pds5aQ6A026 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pds5aQ6A026 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pds5aQ6A026 Gm43514-201ENSMUST00000198852 424 ntBASIC16.59■□□□□ 0.25
Pds5aQ6A026 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.59■□□□□ 0.25
Pds5aQ6A026 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pds5aQ6A026 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pds5aQ6A026 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.59■□□□□ 0.25
Pds5aQ6A026 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.59■□□□□ 0.25
Pds5aQ6A026 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pds5aQ6A026 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pds5aQ6A026 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Pds5aQ6A026 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pds5aQ6A026 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pds5aQ6A026 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pds5aQ6A026 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pds5aQ6A026 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pds5aQ6A026 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pds5aQ6A026 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pds5aQ6A026 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pds5aQ6A026 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pds5aQ6A026 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pds5aQ6A026 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pds5aQ6A026 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pds5aQ6A026 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pds5aQ6A026 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pds5aQ6A026 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pds5aQ6A026 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.58■□□□□ 0.24
Pds5aQ6A026 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.58■□□□□ 0.24
Pds5aQ6A026 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pds5aQ6A026 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pds5aQ6A026 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.58■□□□□ 0.24
Pds5aQ6A026 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pds5aQ6A026 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pds5aQ6A026 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pds5aQ6A026 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pds5aQ6A026 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pds5aQ6A026 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pds5aQ6A026 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pds5aQ6A026 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.58■□□□□ 0.24
Pds5aQ6A026 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pds5aQ6A026 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pds5aQ6A026 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pds5aQ6A026 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pds5aQ6A026 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pds5aQ6A026 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pds5aQ6A026 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pds5aQ6A026 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pds5aQ6A026 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pds5aQ6A026 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pds5aQ6A026 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms