Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdzrn3Q69ZS0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdzrn3Q69ZS0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pdzrn3Q69ZS0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdzrn3Q69ZS0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdzrn3Q69ZS0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdzrn3Q69ZS0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pdzrn3Q69ZS0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdzrn3Q69ZS0 Gm44492-201ENSMUST00000197012 141 ntBASIC18.91■□□□□ 0.62
Pdzrn3Q69ZS0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.91■□□□□ 0.62
Pdzrn3Q69ZS0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdzrn3Q69ZS0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pdzrn3Q69ZS0 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.91■□□□□ 0.62
Pdzrn3Q69ZS0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Pdzrn3Q69ZS0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.91■□□□□ 0.62
Pdzrn3Q69ZS0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdzrn3Q69ZS0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdzrn3Q69ZS0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdzrn3Q69ZS0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdzrn3Q69ZS0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdzrn3Q69ZS0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdzrn3Q69ZS0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pdzrn3Q69ZS0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Pdzrn3Q69ZS0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdzrn3Q69ZS0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdzrn3Q69ZS0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pdzrn3Q69ZS0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdzrn3Q69ZS0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pdzrn3Q69ZS0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdzrn3Q69ZS0 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pdzrn3Q69ZS0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Pdzrn3Q69ZS0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Pdzrn3Q69ZS0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.9■□□□□ 0.62
Pdzrn3Q69ZS0 Gm18489-201ENSMUST00000172565 551 ntBASIC18.9■□□□□ 0.62
Pdzrn3Q69ZS0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdzrn3Q69ZS0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdzrn3Q69ZS0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.9■□□□□ 0.62
Pdzrn3Q69ZS0 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdzrn3Q69ZS0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdzrn3Q69ZS0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdzrn3Q69ZS0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdzrn3Q69ZS0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.9■□□□□ 0.62
Pdzrn3Q69ZS0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdzrn3Q69ZS0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdzrn3Q69ZS0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdzrn3Q69ZS0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
Pdzrn3Q69ZS0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Pdzrn3Q69ZS0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pdzrn3Q69ZS0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.62
Pdzrn3Q69ZS0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Pdzrn3Q69ZS0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Pdzrn3Q69ZS0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pdzrn3Q69ZS0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Pdzrn3Q69ZS0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pdzrn3Q69ZS0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pdzrn3Q69ZS0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pdzrn3Q69ZS0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pdzrn3Q69ZS0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pdzrn3Q69ZS0 Gm9682-201ENSMUST00000197505 556 ntBASIC18.89■□□□□ 0.61
Pdzrn3Q69ZS0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Pdzrn3Q69ZS0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pdzrn3Q69ZS0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pdzrn3Q69ZS0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.89■□□□□ 0.61
Pdzrn3Q69ZS0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.89■□□□□ 0.61
Pdzrn3Q69ZS0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pdzrn3Q69ZS0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.89■□□□□ 0.61
Pdzrn3Q69ZS0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.89■□□□□ 0.61
Pdzrn3Q69ZS0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pdzrn3Q69ZS0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.89■□□□□ 0.61
Pdzrn3Q69ZS0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.89■□□□□ 0.61
Pdzrn3Q69ZS0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Pdzrn3Q69ZS0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.88■□□□□ 0.61
Pdzrn3Q69ZS0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdzrn3Q69ZS0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdzrn3Q69ZS0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdzrn3Q69ZS0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Pdzrn3Q69ZS0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdzrn3Q69ZS0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdzrn3Q69ZS0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pdzrn3Q69ZS0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pdzrn3Q69ZS0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pdzrn3Q69ZS0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.88■□□□□ 0.61
Pdzrn3Q69ZS0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pdzrn3Q69ZS0 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.88■□□□□ 0.61
Pdzrn3Q69ZS0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdzrn3Q69ZS0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdzrn3Q69ZS0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pdzrn3Q69ZS0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdzrn3Q69ZS0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdzrn3Q69ZS0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pdzrn3Q69ZS0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdzrn3Q69ZS0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdzrn3Q69ZS0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.87■□□□□ 0.61
Pdzrn3Q69ZS0 Gm14057-201ENSMUST00000120631 482 ntBASIC18.87■□□□□ 0.61
Pdzrn3Q69ZS0 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Pdzrn3Q69ZS0 Mir1895-201ENSMUST00000122615 79 ntBASIC18.87■□□□□ 0.61
Pdzrn3Q69ZS0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Pdzrn3Q69ZS0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdzrn3Q69ZS0 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.87■□□□□ 0.61
Pdzrn3Q69ZS0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms