Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Six3Q62233 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Six3Q62233 Gm9172-201ENSMUST00000212092 954 ntBASIC15.13■□□□□ 0.01
Six3Q62233 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Six3Q62233 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Six3Q62233 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Six3Q62233 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Six3Q62233 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Six3Q62233 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Six3Q62233 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.13■□□□□ 0.01
Six3Q62233 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Six3Q62233 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Six3Q62233 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
Six3Q62233 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.13■□□□□ 0.01
Six3Q62233 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.13■□□□□ 0.01
Six3Q62233 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Six3Q62233 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Six3Q62233 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Six3Q62233 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six3Q62233 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six3Q62233 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six3Q62233 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six3Q62233 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six3Q62233 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Six3Q62233 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six3Q62233 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.12■□□□□ 0.01
Six3Q62233 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six3Q62233 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six3Q62233 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Six3Q62233 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Six3Q62233 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Six3Q62233 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Six3Q62233 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six3Q62233 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six3Q62233 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six3Q62233 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six3Q62233 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six3Q62233 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six3Q62233 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.11■□□□□ 0.01
Six3Q62233 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Six3Q62233 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Six3Q62233 Gm33142-201ENSMUST00000193913 867 ntBASIC15.11■□□□□ 0.01
Six3Q62233 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.11■□□□□ 0.01
Six3Q62233 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six3Q62233 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six3Q62233 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six3Q62233 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six3Q62233 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six3Q62233 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six3Q62233 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.11■□□□□ 0.01
Six3Q62233 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six3Q62233 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six3Q62233 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six3Q62233 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six3Q62233 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six3Q62233 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six3Q62233 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Six3Q62233 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six3Q62233 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Six3Q62233 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.1■□□□□ 0.01
Six3Q62233 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six3Q62233 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six3Q62233 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six3Q62233 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.1■□□□□ 0.01
Six3Q62233 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Six3Q62233 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six3Q62233 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six3Q62233 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Six3Q62233 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.1■□□□□ 0.01
Six3Q62233 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Six3Q62233 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six3Q62233 Gm7506-201ENSMUST00000207758 815 ntBASIC15.1■□□□□ 0.01
Six3Q62233 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six3Q62233 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six3Q62233 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six3Q62233 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Six3Q62233 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Six3Q62233 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six3Q62233 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six3Q62233 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Six3Q62233 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six3Q62233 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Six3Q62233 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six3Q62233 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.1■□□□□ 0.01
Six3Q62233 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six3Q62233 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six3Q62233 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.09■□□□□ 0.01
Six3Q62233 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.09■□□□□ 0.01
Six3Q62233 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six3Q62233 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six3Q62233 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Six3Q62233 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six3Q62233 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six3Q62233 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Six3Q62233 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Six3Q62233 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six3Q62233 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.09■□□□□ 0.01
Six3Q62233 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.09■□□□□ 0.01
Six3Q62233 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.09■□□□□ 0.01
Six3Q62233 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms