Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VcanQ62059 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VcanQ62059 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VcanQ62059 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VcanQ62059 Gm37424-201ENSMUST00000191727 561 ntBASIC14.37□□□□□ -0.11
VcanQ62059 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.37□□□□□ -0.11
VcanQ62059 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.37□□□□□ -0.11
VcanQ62059 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.37□□□□□ -0.11
VcanQ62059 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VcanQ62059 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VcanQ62059 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VcanQ62059 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VcanQ62059 Mir1982-201ENSMUST00000157368 74 ntBASIC14.37□□□□□ -0.11
VcanQ62059 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.37□□□□□ -0.11
VcanQ62059 Shd-206ENSMUST00000225145 998 ntBASIC14.37□□□□□ -0.11
VcanQ62059 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VcanQ62059 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VcanQ62059 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VcanQ62059 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VcanQ62059 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VcanQ62059 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.37□□□□□ -0.11
VcanQ62059 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VcanQ62059 Gm15806-201ENSMUST00000120696 955 ntBASIC14.36□□□□□ -0.11
VcanQ62059 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
VcanQ62059 Gm18737-201ENSMUST00000173594 937 ntBASIC14.36□□□□□ -0.11
VcanQ62059 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VcanQ62059 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VcanQ62059 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VcanQ62059 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
VcanQ62059 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VcanQ62059 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VcanQ62059 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VcanQ62059 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.36□□□□□ -0.11
VcanQ62059 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
VcanQ62059 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
VcanQ62059 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.36□□□□□ -0.11
VcanQ62059 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VcanQ62059 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VcanQ62059 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VcanQ62059 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
VcanQ62059 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
VcanQ62059 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.36□□□□□ -0.11
VcanQ62059 Gm36967-201ENSMUST00000193814 266 ntBASIC14.36□□□□□ -0.11
VcanQ62059 Gm18049-201ENSMUST00000208909 581 ntBASIC14.36□□□□□ -0.11
VcanQ62059 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VcanQ62059 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
VcanQ62059 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VcanQ62059 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
VcanQ62059 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VcanQ62059 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VcanQ62059 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VcanQ62059 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VcanQ62059 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VcanQ62059 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VcanQ62059 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.35□□□□□ -0.11
VcanQ62059 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.35□□□□□ -0.11
VcanQ62059 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.35□□□□□ -0.11
VcanQ62059 Gm43703-201ENSMUST00000200523 763 ntBASIC14.35□□□□□ -0.11
VcanQ62059 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.35□□□□□ -0.11
VcanQ62059 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VcanQ62059 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VcanQ62059 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
VcanQ62059 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VcanQ62059 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VcanQ62059 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VcanQ62059 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VcanQ62059 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
VcanQ62059 Gm12742-201ENSMUST00000117326 410 ntBASIC14.35□□□□□ -0.11
VcanQ62059 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.35□□□□□ -0.11
VcanQ62059 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.35□□□□□ -0.11
VcanQ62059 Gm5035-201ENSMUST00000215581 927 ntBASIC14.35□□□□□ -0.11
VcanQ62059 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VcanQ62059 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VcanQ62059 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VcanQ62059 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.35□□□□□ -0.11
VcanQ62059 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.34□□□□□ -0.11
VcanQ62059 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.34□□□□□ -0.11
VcanQ62059 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.34□□□□□ -0.11
VcanQ62059 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.34□□□□□ -0.11
VcanQ62059 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.34□□□□□ -0.11
VcanQ62059 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.34□□□□□ -0.11
VcanQ62059 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
VcanQ62059 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms