Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Gli3Q61602 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Gli3Q61602 Gm12341-201ENSMUST00000119724 503 ntBASIC20.62■□□□□ 0.89
Gli3Q61602 Gm6222-201ENSMUST00000120787 396 ntBASIC20.62■□□□□ 0.89
Gli3Q61602 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC20.62■□□□□ 0.89
Gli3Q61602 Rn7s1-201ENSMUST00000174924 300 ntBASIC20.62■□□□□ 0.89
Gli3Q61602 Rn7s2-201ENSMUST00000175032 300 ntBASIC20.62■□□□□ 0.89
Gli3Q61602 Gm26461-201ENSMUST00000175064 290 ntBASIC20.62■□□□□ 0.89
Gli3Q61602 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gli3Q61602 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Gli3Q61602 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC20.62■□□□□ 0.89
Gli3Q61602 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gli3Q61602 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC20.62■□□□□ 0.89
Gli3Q61602 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gli3Q61602 Gm9229-201ENSMUST00000222777 126 ntBASIC20.62■□□□□ 0.89
Gli3Q61602 Gm13337-201ENSMUST00000119183 1594 ntBASIC20.62■□□□□ 0.89
Gli3Q61602 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gli3Q61602 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Gli3Q61602 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC20.61■□□□□ 0.89
Gli3Q61602 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gli3Q61602 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gli3Q61602 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC20.61■□□□□ 0.89
Gli3Q61602 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gli3Q61602 Trav4d-2-201ENSMUST00000120914 335 ntBASIC20.61■□□□□ 0.89
Gli3Q61602 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC20.61■□□□□ 0.89
Gli3Q61602 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gli3Q61602 Gm3786-201ENSMUST00000202659 378 ntBASIC20.61■□□□□ 0.89
Gli3Q61602 AC159747.1-201ENSMUST00000219903 265 ntBASIC20.61■□□□□ 0.89
Gli3Q61602 CT009510.1-201ENSMUST00000227972 270 ntBASIC20.61■□□□□ 0.89
Gli3Q61602 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gli3Q61602 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gli3Q61602 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gli3Q61602 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gli3Q61602 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gli3Q61602 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gli3Q61602 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gli3Q61602 Gm6756-201ENSMUST00000180647 1620 ntBASIC20.6■□□□□ 0.89
Gli3Q61602 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gli3Q61602 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gli3Q61602 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Gli3Q61602 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gli3Q61602 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gli3Q61602 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Gli3Q61602 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC20.6■□□□□ 0.89
Gli3Q61602 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC20.6■□□□□ 0.89
Gli3Q61602 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gli3Q61602 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gli3Q61602 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gli3Q61602 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Gli3Q61602 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gli3Q61602 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gli3Q61602 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gli3Q61602 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gli3Q61602 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gli3Q61602 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gli3Q61602 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gli3Q61602 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gli3Q61602 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gli3Q61602 Gm44799-201ENSMUST00000207639 1202 ntBASIC20.59■□□□□ 0.89
Gli3Q61602 AC149588.3-201ENSMUST00000227515 150 ntBASIC20.59■□□□□ 0.89
Gli3Q61602 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gli3Q61602 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gli3Q61602 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gli3Q61602 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Gli3Q61602 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.59■□□□□ 0.89
Gli3Q61602 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gli3Q61602 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Gli3Q61602 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gli3Q61602 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gli3Q61602 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gli3Q61602 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gli3Q61602 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gli3Q61602 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Gli3Q61602 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC20.59■□□□□ 0.89
Gli3Q61602 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gli3Q61602 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gli3Q61602 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Gli3Q61602 Gm38241-201ENSMUST00000192641 898 ntBASIC20.59■□□□□ 0.89
Gli3Q61602 AA619741-201ENSMUST00000195095 646 ntBASIC20.59■□□□□ 0.89
Gli3Q61602 Gm9728-201ENSMUST00000200197 1055 ntBASIC20.59■□□□□ 0.89
Gli3Q61602 AC140451.2-201ENSMUST00000228030 664 ntBASIC20.59■□□□□ 0.89
Gli3Q61602 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC20.59■□□□□ 0.89
Gli3Q61602 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gli3Q61602 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Gli3Q61602 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gli3Q61602 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gli3Q61602 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gli3Q61602 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gli3Q61602 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gli3Q61602 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Gli3Q61602 Gm7558-201ENSMUST00000193221 1165 ntBASIC20.58■□□□□ 0.88
Gli3Q61602 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Gli3Q61602 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gli3Q61602 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC20.58■□□□□ 0.88
Gli3Q61602 AC150560.1-201ENSMUST00000227731 1187 ntBASIC20.58■□□□□ 0.88
Gli3Q61602 Gm5912-201ENSMUST00000122282 1438 ntBASIC20.58■□□□□ 0.88
Gli3Q61602 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Gli3Q61602 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC20.58■□□□□ 0.88
Gli3Q61602 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC20.58■□□□□ 0.88
Gli3Q61602 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms