Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Foxc1Q61572 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Foxc1Q61572 Gm12439-201ENSMUST00000117162 365 ntBASIC11.38□□□□□ -0.59
Foxc1Q61572 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.38□□□□□ -0.59
Foxc1Q61572 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.38□□□□□ -0.59
Foxc1Q61572 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.38□□□□□ -0.59
Foxc1Q61572 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Foxc1Q61572 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Foxc1Q61572 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Foxc1Q61572 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Foxc1Q61572 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.37□□□□□ -0.59
Foxc1Q61572 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.37□□□□□ -0.59
Foxc1Q61572 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Gm25406-201ENSMUST00000157599 105 ntBASIC11.37□□□□□ -0.59
Foxc1Q61572 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC11.37□□□□□ -0.59
Foxc1Q61572 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Foxc1Q61572 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Gm9172-201ENSMUST00000212092 954 ntBASIC11.37□□□□□ -0.59
Foxc1Q61572 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.37□□□□□ -0.59
Foxc1Q61572 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Foxc1Q61572 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.37□□□□□ -0.59
Foxc1Q61572 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Foxc1Q61572 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Foxc1Q61572 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Foxc1Q61572 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Foxc1Q61572 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Foxc1Q61572 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.36□□□□□ -0.59
Foxc1Q61572 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC11.36□□□□□ -0.59
Foxc1Q61572 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11.36□□□□□ -0.59
Foxc1Q61572 Gm27867-201ENSMUST00000184778 125 ntBASIC11.36□□□□□ -0.59
Foxc1Q61572 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.36□□□□□ -0.59
Foxc1Q61572 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.36□□□□□ -0.59
Foxc1Q61572 Rps4l-201ENSMUST00000071745 943 ntBASIC11.36□□□□□ -0.59
Foxc1Q61572 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Foxc1Q61572 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.36□□□□□ -0.59
Foxc1Q61572 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC11.36□□□□□ -0.59
Foxc1Q61572 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Foxc1Q61572 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms