Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Scnn1aQ61180 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.7■□□□□ 0.42
Scnn1aQ61180 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.7■□□□□ 0.42
Scnn1aQ61180 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.7■□□□□ 0.42
Scnn1aQ61180 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.7■□□□□ 0.42
Scnn1aQ61180 Gm10154-201ENSMUST00000084445 354 ntBASIC17.7■□□□□ 0.42
Scnn1aQ61180 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.7■□□□□ 0.42
Scnn1aQ61180 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scnn1aQ61180 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.69■□□□□ 0.42
Scnn1aQ61180 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Scnn1aQ61180 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scnn1aQ61180 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scnn1aQ61180 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.68■□□□□ 0.42
Scnn1aQ61180 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scnn1aQ61180 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scnn1aQ61180 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scnn1aQ61180 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scnn1aQ61180 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scnn1aQ61180 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Scnn1aQ61180 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scnn1aQ61180 Gm14701-201ENSMUST00000117156 348 ntBASIC17.68■□□□□ 0.42
Scnn1aQ61180 Gm13365-201ENSMUST00000121188 973 ntBASIC17.68■□□□□ 0.42
Scnn1aQ61180 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Scnn1aQ61180 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Scnn1aQ61180 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scnn1aQ61180 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.68■□□□□ 0.42
Scnn1aQ61180 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scnn1aQ61180 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scnn1aQ61180 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.68■□□□□ 0.42
Scnn1aQ61180 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scnn1aQ61180 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scnn1aQ61180 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Scnn1aQ61180 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Scnn1aQ61180 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Scnn1aQ61180 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scnn1aQ61180 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scnn1aQ61180 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scnn1aQ61180 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scnn1aQ61180 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scnn1aQ61180 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scnn1aQ61180 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scnn1aQ61180 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Scnn1aQ61180 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scnn1aQ61180 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Scnn1aQ61180 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scnn1aQ61180 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scnn1aQ61180 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scnn1aQ61180 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.67■□□□□ 0.42
Scnn1aQ61180 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms