Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
ClpbQ60649 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
ClpbQ60649 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.84□□□□□ -0.03
ClpbQ60649 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClpbQ60649 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ClpbQ60649 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
ClpbQ60649 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
ClpbQ60649 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ClpbQ60649 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ClpbQ60649 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpbQ60649 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ClpbQ60649 Gm18733-201ENSMUST00000173950 856 ntBASIC14.83□□□□□ -0.04
ClpbQ60649 Gm4535-201ENSMUST00000182274 558 ntBASIC14.83□□□□□ -0.04
ClpbQ60649 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.83□□□□□ -0.04
ClpbQ60649 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpbQ60649 Gm8655-201ENSMUST00000221159 852 ntBASIC14.83□□□□□ -0.04
ClpbQ60649 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpbQ60649 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpbQ60649 Gm10355-201ENSMUST00000097146 517 ntBASIC14.83□□□□□ -0.04
ClpbQ60649 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.83□□□□□ -0.04
ClpbQ60649 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
ClpbQ60649 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpbQ60649 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ClpbQ60649 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpbQ60649 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpbQ60649 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpbQ60649 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ClpbQ60649 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpbQ60649 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ClpbQ60649 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpbQ60649 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpbQ60649 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpbQ60649 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpbQ60649 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpbQ60649 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpbQ60649 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpbQ60649 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpbQ60649 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpbQ60649 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpbQ60649 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpbQ60649 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ClpbQ60649 Gm7862-201ENSMUST00000121461 292 ntBASIC14.82□□□□□ -0.04
ClpbQ60649 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpbQ60649 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
ClpbQ60649 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ClpbQ60649 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
ClpbQ60649 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
ClpbQ60649 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.82□□□□□ -0.04
ClpbQ60649 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.82□□□□□ -0.04
ClpbQ60649 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpbQ60649 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpbQ60649 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpbQ60649 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpbQ60649 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpbQ60649 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpbQ60649 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.82□□□□□ -0.04
ClpbQ60649 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpbQ60649 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpbQ60649 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.82□□□□□ -0.04
ClpbQ60649 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ClpbQ60649 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.81□□□□□ -0.04
ClpbQ60649 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpbQ60649 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpbQ60649 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpbQ60649 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
ClpbQ60649 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.81□□□□□ -0.04
ClpbQ60649 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpbQ60649 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpbQ60649 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ClpbQ60649 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpbQ60649 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
ClpbQ60649 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpbQ60649 Gm8097-201ENSMUST00000117903 829 ntBASIC14.81□□□□□ -0.04
ClpbQ60649 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.81□□□□□ -0.04
ClpbQ60649 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ClpbQ60649 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ClpbQ60649 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ClpbQ60649 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ClpbQ60649 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
ClpbQ60649 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ClpbQ60649 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpbQ60649 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
ClpbQ60649 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpbQ60649 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.81□□□□□ -0.04
ClpbQ60649 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
ClpbQ60649 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms