Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nr1h4Q60641 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.73□□□□□ -0.05
Nr1h4Q60641 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1h4Q60641 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1h4Q60641 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1h4Q60641 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1h4Q60641 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1h4Q60641 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Nr1h4Q60641 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1h4Q60641 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1h4Q60641 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1h4Q60641 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1h4Q60641 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Nr1h4Q60641 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.72□□□□□ -0.05
Nr1h4Q60641 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Nr1h4Q60641 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.72□□□□□ -0.05
Nr1h4Q60641 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1h4Q60641 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1h4Q60641 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Nr1h4Q60641 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1h4Q60641 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1h4Q60641 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Nr1h4Q60641 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1h4Q60641 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1h4Q60641 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1h4Q60641 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nr1h4Q60641 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Nr1h4Q60641 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Mir770-201ENSMUST00000103252 94 ntBASIC14.71□□□□□ -0.05
Nr1h4Q60641 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nr1h4Q60641 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Nr1h4Q60641 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nr1h4Q60641 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
Nr1h4Q60641 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nr1h4Q60641 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nr1h4Q60641 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Nr1h4Q60641 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Nr1h4Q60641 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nr1h4Q60641 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.71□□□□□ -0.06
Nr1h4Q60641 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nr1h4Q60641 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1h4Q60641 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1h4Q60641 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1h4Q60641 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1h4Q60641 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1h4Q60641 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1h4Q60641 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1h4Q60641 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1h4Q60641 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1h4Q60641 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.7□□□□□ -0.06
Nr1h4Q60641 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Nr1h4Q60641 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.7□□□□□ -0.06
Nr1h4Q60641 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Nr1h4Q60641 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.7□□□□□ -0.06
Nr1h4Q60641 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1h4Q60641 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1h4Q60641 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1h4Q60641 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1h4Q60641 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1h4Q60641 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.7□□□□□ -0.06
Nr1h4Q60641 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1h4Q60641 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1h4Q60641 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1h4Q60641 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1h4Q60641 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1h4Q60641 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1h4Q60641 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nr1h4Q60641 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Nr1h4Q60641 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1h4Q60641 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1h4Q60641 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1h4Q60641 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nr1h4Q60641 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.69□□□□□ -0.06
Nr1h4Q60641 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms