Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc88aQ5SNZ0 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.63■□□□□ 0.41
Ccdc88aQ5SNZ0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc88aQ5SNZ0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ccdc88aQ5SNZ0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc88aQ5SNZ0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc88aQ5SNZ0 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc88aQ5SNZ0 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc88aQ5SNZ0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.63■□□□□ 0.41
Ccdc88aQ5SNZ0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc88aQ5SNZ0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc88aQ5SNZ0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc88aQ5SNZ0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc88aQ5SNZ0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.63■□□□□ 0.41
Ccdc88aQ5SNZ0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm38294-201ENSMUST00000192831 381 ntBASIC17.63■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc88aQ5SNZ0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.63■□□□□ 0.41
Ccdc88aQ5SNZ0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc88aQ5SNZ0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc88aQ5SNZ0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc88aQ5SNZ0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc88aQ5SNZ0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.62■□□□□ 0.41
Ccdc88aQ5SNZ0 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc88aQ5SNZ0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc88aQ5SNZ0 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc88aQ5SNZ0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc88aQ5SNZ0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.62■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc88aQ5SNZ0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.62■□□□□ 0.41
Ccdc88aQ5SNZ0 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.62■□□□□ 0.41
Ccdc88aQ5SNZ0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc88aQ5SNZ0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc88aQ5SNZ0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc88aQ5SNZ0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm22065-201ENSMUST00000103753 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm22066-201ENSMUST00000103761 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm24932-201ENSMUST00000103763 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm24115-201ENSMUST00000103799 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm22190-201ENSMUST00000103827 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm22191-201ENSMUST00000103831 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm24721-201ENSMUST00000103849 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm28018-201ENSMUST00000103869 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm26399-201ENSMUST00000103937 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm25349-201ENSMUST00000177728 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm23616-201ENSMUST00000177797 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm25871-201ENSMUST00000177816 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm24752-201ENSMUST00000178240 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm24496-201ENSMUST00000178287 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm25649-201ENSMUST00000178476 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm25548-201ENSMUST00000178681 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm23147-201ENSMUST00000178841 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm26095-201ENSMUST00000179270 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm22171-201ENSMUST00000179283 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm23936-201ENSMUST00000179354 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm22619-201ENSMUST00000179516 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm25255-201ENSMUST00000179579 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm24755-201ENSMUST00000179691 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm26506-201ENSMUST00000179692 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm25086-201ENSMUST00000179931 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm23243-201ENSMUST00000180047 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm24659-201ENSMUST00000180212 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm24169-201ENSMUST00000180244 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm23689-201ENSMUST00000180354 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm27359-201ENSMUST00000184153 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm27785-201ENSMUST00000184268 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm27466-201ENSMUST00000184396 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm27703-201ENSMUST00000184836 110 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 Gm13223-201ENSMUST00000118609 747 ntBASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Ccdc88aQ5SNZ0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms