Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trav8d-1Q5R1H8 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trav8d-1Q5R1H8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.71□□□□□ -0.38
Trav8d-1Q5R1H8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav8d-1Q5R1H8 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav8d-1Q5R1H8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav8d-1Q5R1H8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav8d-1Q5R1H8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav8d-1Q5R1H8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav8d-1Q5R1H8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav8d-1Q5R1H8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Trav8d-1Q5R1H8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
Trav8d-1Q5R1H8 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav8d-1Q5R1H8 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav8d-1Q5R1H8 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav8d-1Q5R1H8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav8d-1Q5R1H8 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Trav8d-1Q5R1H8 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav8d-1Q5R1H8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav8d-1Q5R1H8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav8d-1Q5R1H8 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav8d-1Q5R1H8 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 Gm11355-201ENSMUST00000121120 306 ntBASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8d-1Q5R1H8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Gm9013-201ENSMUST00000132939 882 ntBASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav8d-1Q5R1H8 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8d-1Q5R1H8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms