Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-3Q5R1E6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Gm6659-201ENSMUST00000174752 547 ntBASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-3Q5R1E6 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav6-3Q5R1E6 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-3Q5R1E6 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-3Q5R1E6 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav6-3Q5R1E6 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav6-3Q5R1E6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-3Q5R1E6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-3Q5R1E6 Gm27742-201ENSMUST00000184667 60 ntBASIC12.4□□□□□ -0.42
Trav6-3Q5R1E6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-3Q5R1E6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-3Q5R1E6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-3Q5R1E6 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-3Q5R1E6 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-3Q5R1E6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-3Q5R1E6 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav6-3Q5R1E6 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav6-3Q5R1E6 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trav6-3Q5R1E6 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav6-3Q5R1E6 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trav6-3Q5R1E6 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Trav6-3Q5R1E6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Gm8344-201ENSMUST00000119813 856 ntBASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Olfr129-201ENSMUST00000122318 993 ntBASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms