Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf20Q5DTM8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf20Q5DTM8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf20Q5DTM8 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.54
Rnf20Q5DTM8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf20Q5DTM8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf20Q5DTM8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf20Q5DTM8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf20Q5DTM8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf20Q5DTM8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf20Q5DTM8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Rnf20Q5DTM8 Gm15358-201ENSMUST00000119249 520 ntBASIC18.39■□□□□ 0.53
Rnf20Q5DTM8 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.39■□□□□ 0.53
Rnf20Q5DTM8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf20Q5DTM8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.39■□□□□ 0.53
Rnf20Q5DTM8 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf20Q5DTM8 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.39■□□□□ 0.53
Rnf20Q5DTM8 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf20Q5DTM8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rnf20Q5DTM8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf20Q5DTM8 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Rnf20Q5DTM8 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf20Q5DTM8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf20Q5DTM8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf20Q5DTM8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rnf20Q5DTM8 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf20Q5DTM8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf20Q5DTM8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf20Q5DTM8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf20Q5DTM8 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.38■□□□□ 0.53
Rnf20Q5DTM8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf20Q5DTM8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.38■□□□□ 0.53
Rnf20Q5DTM8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf20Q5DTM8 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf20Q5DTM8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.38■□□□□ 0.53
Rnf20Q5DTM8 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf20Q5DTM8 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf20Q5DTM8 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf20Q5DTM8 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.38■□□□□ 0.53
Rnf20Q5DTM8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf20Q5DTM8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf20Q5DTM8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf20Q5DTM8 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.37■□□□□ 0.53
Rnf20Q5DTM8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf20Q5DTM8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf20Q5DTM8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.37■□□□□ 0.53
Rnf20Q5DTM8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.37■□□□□ 0.53
Rnf20Q5DTM8 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.37■□□□□ 0.53
Rnf20Q5DTM8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf20Q5DTM8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.37■□□□□ 0.53
Rnf20Q5DTM8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf20Q5DTM8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.37■□□□□ 0.53
Rnf20Q5DTM8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf20Q5DTM8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Rnf20Q5DTM8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf20Q5DTM8 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Rnf20Q5DTM8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.37■□□□□ 0.53
Rnf20Q5DTM8 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf20Q5DTM8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf20Q5DTM8 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf20Q5DTM8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf20Q5DTM8 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf20Q5DTM8 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf20Q5DTM8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms