Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm21901-201ENSMUST00000189568 696 ntBASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Gm29424-201ENSMUST00000189716 696 ntBASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Gm28599-201ENSMUST00000189838 694 ntBASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Gm21867-201ENSMUST00000189917 696 ntBASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Gm29269-201ENSMUST00000190087 696 ntBASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Gm21722-201ENSMUST00000190153 696 ntBASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Gm28423-201ENSMUST00000190701 696 ntBASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Gm21899-201ENSMUST00000190745 696 ntBASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Gm21910-201ENSMUST00000191163 696 ntBASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Gm21849-201ENSMUST00000191571 696 ntBASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Gm28678-201ENSMUST00000191593 696 ntBASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Gm20910-201ENSMUST00000193268 696 ntBASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Gm21871-201ENSMUST00000194621 696 ntBASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shank3Q4ACU6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shank3Q4ACU6 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC19■□□□□ 0.63
Shank3Q4ACU6 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC19■□□□□ 0.63
Shank3Q4ACU6 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC19■□□□□ 0.63
Shank3Q4ACU6 Gm6539-201ENSMUST00000119157 1064 ntBASIC19■□□□□ 0.63
Shank3Q4ACU6 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Shank3Q4ACU6 Gm4691-201ENSMUST00000182339 1000 ntBASIC19■□□□□ 0.63
Shank3Q4ACU6 Gm2451-201ENSMUST00000199447 999 ntBASIC19■□□□□ 0.63
Shank3Q4ACU6 Gm10290-201ENSMUST00000200451 999 ntBASIC19■□□□□ 0.63
Shank3Q4ACU6 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC19■□□□□ 0.63
Shank3Q4ACU6 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19■□□□□ 0.63
Shank3Q4ACU6 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19■□□□□ 0.63
Shank3Q4ACU6 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Shank3Q4ACU6 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shank3Q4ACU6 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19■□□□□ 0.63
Shank3Q4ACU6 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shank3Q4ACU6 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shank3Q4ACU6 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC19■□□□□ 0.63
Shank3Q4ACU6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC19■□□□□ 0.63
Shank3Q4ACU6 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC19■□□□□ 0.63
Shank3Q4ACU6 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC19■□□□□ 0.63
Shank3Q4ACU6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC19■□□□□ 0.63
Shank3Q4ACU6 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC19■□□□□ 0.63
Shank3Q4ACU6 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shank3Q4ACU6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shank3Q4ACU6 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Shank3Q4ACU6 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Shank3Q4ACU6 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shank3Q4ACU6 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Shank3Q4ACU6 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.99■□□□□ 0.63
Shank3Q4ACU6 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.99■□□□□ 0.63
Shank3Q4ACU6 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shank3Q4ACU6 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC18.99■□□□□ 0.63
Shank3Q4ACU6 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Shank3Q4ACU6 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC18.99■□□□□ 0.63
Shank3Q4ACU6 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Shank3Q4ACU6 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Shank3Q4ACU6 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC18.99■□□□□ 0.63
Shank3Q4ACU6 Gm6007-201ENSMUST00000208170 823 ntBASIC18.99■□□□□ 0.63
Shank3Q4ACU6 Shd-206ENSMUST00000225145 998 ntBASIC18.99■□□□□ 0.63
Shank3Q4ACU6 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shank3Q4ACU6 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Shank3Q4ACU6 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shank3Q4ACU6 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shank3Q4ACU6 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Shank3Q4ACU6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shank3Q4ACU6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shank3Q4ACU6 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shank3Q4ACU6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shank3Q4ACU6 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC18.98■□□□□ 0.63
Shank3Q4ACU6 Gm18187-201ENSMUST00000196476 984 ntBASIC18.98■□□□□ 0.63
Shank3Q4ACU6 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.98■□□□□ 0.63
Shank3Q4ACU6 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shank3Q4ACU6 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shank3Q4ACU6 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shank3Q4ACU6 Gm6180-201ENSMUST00000065243 498 ntBASIC18.98■□□□□ 0.63
Shank3Q4ACU6 Gm25857-201ENSMUST00000082788 129 ntBASIC18.98■□□□□ 0.63
Shank3Q4ACU6 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shank3Q4ACU6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Shank3Q4ACU6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shank3Q4ACU6 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shank3Q4ACU6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shank3Q4ACU6 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shank3Q4ACU6 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Shank3Q4ACU6 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shank3Q4ACU6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shank3Q4ACU6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shank3Q4ACU6 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Shank3Q4ACU6 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shank3Q4ACU6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shank3Q4ACU6 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Shank3Q4ACU6 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Shank3Q4ACU6 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shank3Q4ACU6 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Shank3Q4ACU6 Gm8515-201ENSMUST00000194852 576 ntBASIC18.97■□□□□ 0.63
Shank3Q4ACU6 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shank3Q4ACU6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Shank3Q4ACU6 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shank3Q4ACU6 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shank3Q4ACU6 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms