Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc27Q3V036 Gm43399-201ENSMUST00000202546 2374 ntBASIC19.74■□□□□ 0.75
Ccdc27Q3V036 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc27Q3V036 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc27Q3V036 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc27Q3V036 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc27Q3V036 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc27Q3V036 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc27Q3V036 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc27Q3V036 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc27Q3V036 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc27Q3V036 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc27Q3V036 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc27Q3V036 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc27Q3V036 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc27Q3V036 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc27Q3V036 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc27Q3V036 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc27Q3V036 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc27Q3V036 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc27Q3V036 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc27Q3V036 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc27Q3V036 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc27Q3V036 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc27Q3V036 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc27Q3V036 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc27Q3V036 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc27Q3V036 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc27Q3V036 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc27Q3V036 Gm11950-201ENSMUST00000121615 838 ntBASIC19.72■□□□□ 0.75
Ccdc27Q3V036 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.72■□□□□ 0.75
Ccdc27Q3V036 Gm6659-201ENSMUST00000174752 547 ntBASIC19.72■□□□□ 0.75
Ccdc27Q3V036 Gm23634-201ENSMUST00000175071 91 ntBASIC19.72■□□□□ 0.75
Ccdc27Q3V036 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.72■□□□□ 0.75
Ccdc27Q3V036 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc27Q3V036 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc27Q3V036 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ccdc27Q3V036 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc27Q3V036 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc27Q3V036 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc27Q3V036 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc27Q3V036 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc27Q3V036 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc27Q3V036 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc27Q3V036 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 Gm45328-201ENSMUST00000210942 917 ntBASIC19.71■□□□□ 0.75
Ccdc27Q3V036 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc27Q3V036 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc27Q3V036 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc27Q3V036 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc27Q3V036 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc27Q3V036 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc27Q3V036 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc27Q3V036 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC19.7■□□□□ 0.74
Ccdc27Q3V036 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc27Q3V036 Gm29518-201ENSMUST00000190858 372 ntBASIC19.7■□□□□ 0.74
Ccdc27Q3V036 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc27Q3V036 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc27Q3V036 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC19.7■□□□□ 0.74
Ccdc27Q3V036 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc27Q3V036 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc27Q3V036 Tfap2a-203ENSMUST00000223869 2037 ntBASIC19.69■□□□□ 0.74
Ccdc27Q3V036 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ccdc27Q3V036 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc27Q3V036 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc27Q3V036 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc27Q3V036 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc27Q3V036 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc27Q3V036 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc27Q3V036 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc27Q3V036 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc27Q3V036 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc27Q3V036 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc27Q3V036 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc27Q3V036 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms