Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Cks1brtQ3UNC9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Cks1brtQ3UNC9 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Gm15375-201ENSMUST00000119510 849 ntBASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Gm15847-201ENSMUST00000121417 1065 ntBASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Gm21956-201ENSMUST00000179946 522 ntBASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Gm27454-201ENSMUST00000185090 204 ntBASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Appbp2os-202ENSMUST00000206972 447 ntBASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1brtQ3UNC9 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Gm17661-201ENSMUST00000170317 270 ntBASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Gm37025-201ENSMUST00000195159 829 ntBASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms