Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Mir3113-201ENSMUST00000175478 76 ntBASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Gm27702-201ENSMUST00000184512 56 ntBASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Gm2213-201ENSMUST00000197485 688 ntBASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Naf1Q3UMQ8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Naf1Q3UMQ8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Naf1Q3UMQ8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Naf1Q3UMQ8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Naf1Q3UMQ8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Naf1Q3UMQ8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Naf1Q3UMQ8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Naf1Q3UMQ8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.69■□□□□ 0.1
Naf1Q3UMQ8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Naf1Q3UMQ8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Naf1Q3UMQ8 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Naf1Q3UMQ8 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Naf1Q3UMQ8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Naf1Q3UMQ8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Naf1Q3UMQ8 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Naf1Q3UMQ8 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Naf1Q3UMQ8 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Naf1Q3UMQ8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.69■□□□□ 0.1
Naf1Q3UMQ8 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.69■□□□□ 0.1
Naf1Q3UMQ8 Gm7787-201ENSMUST00000216858 688 ntBASIC15.69■□□□□ 0.1
Naf1Q3UMQ8 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.69■□□□□ 0.1
Naf1Q3UMQ8 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Naf1Q3UMQ8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Naf1Q3UMQ8 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Naf1Q3UMQ8 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Naf1Q3UMQ8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.69■□□□□ 0.1
Naf1Q3UMQ8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Naf1Q3UMQ8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Naf1Q3UMQ8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Naf1Q3UMQ8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.68■□□□□ 0.1
Naf1Q3UMQ8 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms