Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Spg7Q3ULF4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Spg7Q3ULF4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.34■□□□□ 0.53
Spg7Q3ULF4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Spg7Q3ULF4 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Spg7Q3ULF4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Spg7Q3ULF4 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Spg7Q3ULF4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Spg7Q3ULF4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Spg7Q3ULF4 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Spg7Q3ULF4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Spg7Q3ULF4 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Spg7Q3ULF4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Spg7Q3ULF4 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Spg7Q3ULF4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.34■□□□□ 0.53
Spg7Q3ULF4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Spg7Q3ULF4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Spg7Q3ULF4 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Spg7Q3ULF4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Spg7Q3ULF4 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Spg7Q3ULF4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Spg7Q3ULF4 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
Spg7Q3ULF4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Spg7Q3ULF4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Spg7Q3ULF4 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Spg7Q3ULF4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Spg7Q3ULF4 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Spg7Q3ULF4 Gm16198-201ENSMUST00000118766 670 ntBASIC18.33■□□□□ 0.52
Spg7Q3ULF4 Gm13365-201ENSMUST00000121188 973 ntBASIC18.33■□□□□ 0.52
Spg7Q3ULF4 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Spg7Q3ULF4 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.33■□□□□ 0.52
Spg7Q3ULF4 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.33■□□□□ 0.52
Spg7Q3ULF4 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Spg7Q3ULF4 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.33■□□□□ 0.52
Spg7Q3ULF4 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Spg7Q3ULF4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.33■□□□□ 0.52
Spg7Q3ULF4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Spg7Q3ULF4 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Spg7Q3ULF4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Spg7Q3ULF4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Spg7Q3ULF4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.33■□□□□ 0.52
Spg7Q3ULF4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Spg7Q3ULF4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Spg7Q3ULF4 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Spg7Q3ULF4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Spg7Q3ULF4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Spg7Q3ULF4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Spg7Q3ULF4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Spg7Q3ULF4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Spg7Q3ULF4 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.32■□□□□ 0.52
Spg7Q3ULF4 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Spg7Q3ULF4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Spg7Q3ULF4 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Spg7Q3ULF4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Spg7Q3ULF4 Rprl2-201ENSMUST00000157150 290 ntBASIC18.32■□□□□ 0.52
Spg7Q3ULF4 Rpph1-201ENSMUST00000175096 319 ntBASIC18.32■□□□□ 0.52
Spg7Q3ULF4 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Spg7Q3ULF4 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.32■□□□□ 0.52
Spg7Q3ULF4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Spg7Q3ULF4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Spg7Q3ULF4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Spg7Q3ULF4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Gm9385-201ENSMUST00000117563 472 ntBASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.31■□□□□ 0.52
Spg7Q3ULF4 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Gm20553-201ENSMUST00000204205 844 ntBASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Gm10154-201ENSMUST00000084445 354 ntBASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Spg7Q3ULF4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.31■□□□□ 0.52
Spg7Q3ULF4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.31■□□□□ 0.52
Spg7Q3ULF4 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Spg7Q3ULF4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Spg7Q3ULF4 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Spg7Q3ULF4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Spg7Q3ULF4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Spg7Q3ULF4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.3■□□□□ 0.52
Spg7Q3ULF4 Gm11745-201ENSMUST00000121669 448 ntBASIC18.3■□□□□ 0.52
Spg7Q3ULF4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms