Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx27Q3UHD6 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Snx27Q3UHD6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.26
Snx27Q3UHD6 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Snx27Q3UHD6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx27Q3UHD6 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx27Q3UHD6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.64■□□□□ 0.25
Snx27Q3UHD6 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx27Q3UHD6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.64■□□□□ 0.25
Snx27Q3UHD6 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx27Q3UHD6 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx27Q3UHD6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Snx27Q3UHD6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx27Q3UHD6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx27Q3UHD6 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.64■□□□□ 0.25
Snx27Q3UHD6 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.64■□□□□ 0.25
Snx27Q3UHD6 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.64■□□□□ 0.25
Snx27Q3UHD6 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.64■□□□□ 0.25
Snx27Q3UHD6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx27Q3UHD6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx27Q3UHD6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx27Q3UHD6 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Snx27Q3UHD6 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Gm16198-201ENSMUST00000118766 670 ntBASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Gm45612-201ENSMUST00000211320 160 ntBASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 App-207ENSMUST00000227737 2827 ntBASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Dancr-204ENSMUST00000132389 2347 ntBASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snx27Q3UHD6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snx27Q3UHD6 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms